RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 LRIG1Q96JA1 1093 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 HAPLN3Q96S86 360 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 STK33Q9BYT3 514 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 ZYG11BQ9C0D3 744 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 NUP62CLQ9H1M0 184 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 ATP13A1Q9HD20 1204 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 SCUBE2Q9NQ36 999 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 METTL5Q9NRN9 209 aaKnown RBP20.92■□□□□ 0.94
TRIM47-207ENST00000593089 TMEM51Q9NW97 253 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 MYLKQ15746 1914 aa20.92■□□□□ 0.94
TRIM47-207ENST00000593089 ILVBLA1L0T0 632 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 F8VZ95 297 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 URB1O60287 2271 aaKnown RBP20.91■□□□□ 0.94
TRIM47-207ENST00000593089 CKMT2P17540 419 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ATP11AP98196 1134 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 TARDBPQ13148 414 aaKnown RBP eCLIP20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ZNF284Q2VY69 593 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 TCP11X2Q5H9J9 407 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ARTNQ5T4W7 220 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 RETSATQ6NUM9 610 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 FBXL19Q6PCT2 694 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 DPY19L3Q6ZPD9 716 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 BNIPLQ7Z465 357 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 DRC7Q8IY82 874 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 EMC1Q8N766 993 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ARID1BQ8NFD5 2236 aaPredicted RBP20.91■□□□□ 0.94
TRIM47-207ENST00000593089 EPS8L1Q8TE68 723 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 NXPE2Q96DL1 559 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 DCBLD2Q96PD2 775 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 CALN1Q9BXU9 219 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 TAB2Q9NYJ8 693 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ZFR2Q9UPR6 939 aaKnown RBP20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ITPR1Q14643 2758 aa20.91■□□□□ 0.94
TRIM47-207ENST00000593089 ZNF821O75541 412 aaPredicted RBP20.9■□□□□ 0.94
TRIM47-207ENST00000593089 LEFTY1O75610 366 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 HNRNPA2B1P22626 353 aaKnown RBP20.9■□□□□ 0.94
TRIM47-207ENST00000593089 EEF1GP26641 437 aaKnown RBP20.9■□□□□ 0.94
TRIM47-207ENST00000593089 AKT2P31751 481 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 SERPINH1P50454 418 aaKnown RBP20.9■□□□□ 0.94
TRIM47-207ENST00000593089 DNA2P51530 1060 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 SEL1L3Q68CR1 1132 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 PHLDB2Q86SQ0 1253 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 OR13H1Q8NG92 308 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 SLC20A1Q8WUM9 679 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 PPP1R16AQ96I34 528 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 HDAC8Q9BY41 377 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 ZNF212Q9UDV6 495 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 WASF2Q9Y6W5 498 aa20.9■□□□□ 0.94
TRIM47-207ENST00000593089 NBEAQ8NFP9 2946 aa20.89■□□□□ 0.94
TRIM47-207ENST00000593089 TDRD6O60522 2096 aaKnown RBP20.89■□□□□ 0.93
TRIM47-207ENST00000593089 TRIM38O00635 465 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 SIGLEC6O43699 453 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 ZMPSTE24O75844 475 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 GFPT2O94808 682 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 CLDN2P57739 230 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 ARF5P84085 180 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 GNA12Q03113 381 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 CDO1Q16878 200 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 PROX2Q3B8N5 592 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 RAB6CQ53S08 254 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 ZNF783Q6ZMS7 281 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 SLC25A45Q8N413 288 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 RAB6CQ9H0N0 254 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 CAAP1Q9H8G2 361 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 UCKL1Q9NWZ5 548 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 FCF1Q9Y324 198 aaKnown RBP20.89■□□□□ 0.93
TRIM47-207ENST00000593089 ACTL7AQ9Y615 435 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 AK5Q9Y6K8 562 aa20.89■□□□□ 0.93
TRIM47-207ENST00000593089 KNTC1P50748 2209 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 DGKAP23743 735 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 KLK7P49862 253 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 NEK3P51956 506 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 SEMG2Q02383 582 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-207ENST00000593089 ILKQ13418 452 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 C15orf59Q2T9L4 293 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-207ENST00000593089 HS1BP3Q53T59 392 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 CARD16Q5EG05 197 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 GCNT7Q6ZNI0 430 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 ARCQ7LC44 396 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 PCDH20Q8N6Y1 951 aaKnown RBP20.88■□□□□ 0.93
TRIM47-207ENST00000593089 HEPHQ9BQS7 1158 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 CEP44Q9C0F1 390 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 VPS16Q9H269 839 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 GANQ9H2C0 597 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 KLHL11Q9NVR0 708 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 PPARGC1AQ9UBK2 798 aaKnown RBP20.88■□□□□ 0.93
TRIM47-207ENST00000593089 NOCTQ9UK39 431 aaKnown RBP20.88■□□□□ 0.93
TRIM47-207ENST00000593089 ATRXP46100 2492 aa20.88■□□□□ 0.93
TRIM47-207ENST00000593089 A0A087WV48 116 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 FFAR2O15552 330 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 ADRB3P13945 408 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 ACP1P24666 158 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 CCNHP51946 323 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-207ENST00000593089 DAB2P98082 770 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 SLC20A2Q08357 652 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 ZNF211Q13398 564 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-207ENST00000593089 SOWAHCQ53LP3 525 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-207ENST00000593089 ZNF677Q86XU0 584 aa20.87■□□□□ 0.93
TRIM47-207ENST00000593089 RXFP2Q8WXD0 754 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms