RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 PGGT1BP53609 377 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 SFSWAPQ12872 951 aaKnown RBP18.25■□□□□ 0.51
SPC24-206ENST00000592540 GRM3Q14832 879 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 ANO4Q32M45 955 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 TREML2Q5T2D2 321 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 GK5Q6ZS86 529 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 STRADAQ7RTN6 431 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 TP53INP2Q8IXH6 220 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 DNAAF3Q8N9W5 541 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 SLCO4A1Q96BD0 722 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 SCYL1Q96KG9 808 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 PLGRKTQ9HBL7 147 aa18.25■□□□□ 0.51
SPC24-206ENST00000592540 E7ENX8 843 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 KCNK1O00180 336 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 DDHD2O94830 711 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 EDNRBP24530 442 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 MTX3Q5HYI7 312 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 GLRA4Q5JXX5 417 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 HM13Q8TCT9 377 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 RNF139Q8WU17 664 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 STYXQ8WUJ0 223 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 TOP1MTQ969P6 601 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 TSNARE1Q96NA8 513 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 MRPL40Q9NQ50 206 aaKnown RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 CASS4Q9NQ75 786 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 FAIMQ9NVQ4 179 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 TBCCD1Q9NVR7 557 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPC24-206ENST00000592540 KLHL8Q9P2G9 620 aaPredicted RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 ZNHIT2Q9UHR6 403 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 IPO11Q9UI26 975 aaKnown RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 MAGED2Q9UNF1 606 aaPredicted RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 RUVBL2Q9Y230 463 aaKnown RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 SNX13Q9Y5W8 968 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 SH3PXD2BA1X283 911 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 SOWAHBA6NEL2 793 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 PLOD2O00469 737 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 PHGDHO43175 533 aaKnown RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 BMP10O95393 424 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 SAT1P21673 171 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 AMHR2Q16671 573 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 CERCAMQ5T4B2 595 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 PLPPR4Q7Z2D5 763 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 HERC6Q8IVU3 1022 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 KDM1BQ8NB78 822 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 LPGAT1Q92604 370 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 GPR22Q99680 433 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 CIB1Q99828 191 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 OSBPL6Q9BZF3 934 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 UNC93B1Q9H1C4 597 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 CLK4Q9HAZ1 481 aaKnown RBP18.24■□□□□ 0.51
SPC24-206ENST00000592540 TMPRSS4Q9NRS4 437 aa18.24■□□□□ 0.51
SPC24-206ENST00000592540 TMEM233B4DJY2 109 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 C19orf81C9J6K1 198 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 GOLGA8TH3BQL2 631 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 HTRA2O43464 458 aaPredicted RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 PEX10O60683 326 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 HADHAP40939 763 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 NUP107P57740 925 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 PDAP1Q13442 181 aaKnown RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 Q6ZNX1 250 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 FSTL5Q8N475 847 aaPredicted RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 FIBCD1Q8N539 461 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 C7orf31Q8N865 590 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 KCTD4Q8WVF5 259 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 MAELQ96JY0 434 aaKnown RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 NFKBIZQ9BYH8 718 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 ANKRD60Q9BZ19 345 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 SLC8A2Q9UPR5 921 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 TARM1B6A8C7 271 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 SDHDO14521 159 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 DLX3O60479 287 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 ARIH2O95376 493 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 CYP2C8P10632 490 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 SLC7A1P30825 629 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 SCNN1AP37088 669 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 ENTPD1P49961 510 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 CDH15P55291 814 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 FAM187BQ17R55 369 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 HMBOX1Q6NT76 420 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 SMYD1Q8NB12 490 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 UHRF1Q96T88 793 aaPredicted RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 NOL11Q9H8H0 719 aaKnown RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 CHRAC1Q9NRG0 131 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 FZD1Q9UP38 647 aa18.23■□□□□ 0.51
SPC24-206ENST00000592540 TDRKHQ9Y2W6 561 aaKnown RBP18.23■□□□□ 0.51
SPC24-206ENST00000592540 TCRBV3S1A0A5B6 114 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 FAM155AB1AL88 458 aaPredicted RBP18.22■□□□□ 0.51
SPC24-206ENST00000592540 TRIM24O15164 1050 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 PTPN3P26045 913 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 PHKA2P46019 1235 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 USP10Q14694 798 aaKnown RBP18.22■□□□□ 0.51
SPC24-206ENST00000592540 PAFAH1B3Q15102 231 aaKnown RBP18.22■□□□□ 0.51
SPC24-206ENST00000592540 KIF12Q96FN5 646 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 DUS3LQ96G46 650 aaKnown RBP18.22■□□□□ 0.51
SPC24-206ENST00000592540 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
SPC24-206ENST00000592540 TRPC5OSA6NMA1 111 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms