RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 KCNT1Q5JUK3 1230 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PLA2G2CQ5R387 149 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3GQ6DHY5 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3CQ6IPX1 549 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 C22orf39Q6P5X5 142 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 RFX8Q6ZV50 586 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 GAS2L3Q86XJ1 694 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 TBC1D3Q8IZP1 549 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ARFGAP1Q8N6T3 406 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PCDH20Q8N6Y1 951 aaKnown RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PIP4K2CQ8TBX8 421 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 NETO1Q8TDF5 533 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 MRFAP1L1Q96HT8 127 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 CELF6Q96J87 481 aaKnown RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PEBP4Q96S96 227 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PACSIN1Q9BY11 444 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ACE2Q9BYF1 805 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 CEP44Q9C0F1 390 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PCED1AQ9H1Q7 454 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 NDFIP2Q9NV92 336 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 DLL3Q9NYJ7 618 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 ZNF212Q9UDV6 495 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 IL36AQ9UHA7 158 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 PILRBQ9UKJ0 227 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 SLC6A14Q9UN76 642 aa10.28□□□□□ -0.76
BRCA1-227ENST00000591849 FCF1Q9Y324 198 aaKnown RBP10.28□□□□□ -0.76
BRCA1-227ENST00000591849 WASH4PA8MWX3 477 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 PATE3B3GLJ2 98 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 DFFAO00273 331 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SMAD6O43541 496 aaKnown RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 ZMPSTE24O75844 475 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 PROSCO94903 275 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SYPP08247 313 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 RARAP10276 462 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 ERCC2P18074 760 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 KCNA4P22459 653 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 TGM1P22735 817 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 HOXD12P35452 270 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 HCAR3P49019 387 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 NDST2P52849 883 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SNRPD1P62314 119 aaKnown RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 IRX4P78413 519 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 RAD51Q06609 339 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SEMA3BQ13214 749 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 ASTE1Q2TB18 679 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 DAB2IPQ5VWQ8 1189 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 KIAA0895LQ68EN5 471 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 TCEAL6Q6IPX3 200 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SLC41A1Q8IVJ1 513 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 MAP7D3Q8IWC1 876 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 RHOT2Q8IXI1 618 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 UMODL1-AS1Q8N2C9 162 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 PAF1Q8N7H5 531 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 NIPA2Q8N8Q9 360 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 KCTD6Q8NC69 237 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 OR2A12Q8NGT7 310 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 OR2T34Q8NGX1 318 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SLC35G2Q8TBE7 412 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 GRIN3AQ8TCU5 1115 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 CASKIN2Q8WXE0 1202 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 TCEAL3Q969E4 200 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 HMCESQ96FZ2 354 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 PPP1R16AQ96I34 528 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 HEPHQ9BQS7 1158 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 EDEM2Q9BV94 578 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 GTPBP2Q9BX10 602 aaKnown RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 TM6SF2Q9BZW4 377 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 C6orf106Q9H6K1 298 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 ZDHHC6Q9H6R6 413 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 SP110Q9HB58 689 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 TMEM74BQ9NUR3 256 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 EIF2B4Q9UI10 523 aaKnown RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 FZD4Q9ULV1 537 aa10.27□□□□□ -0.77
BRCA1-227ENST00000591849 CNOT1A5YKK6 2376 aaKnown RBP10.27□□□□□ -0.77
BRCA1-227ENST00000591849 A0A1B0GTW7 788 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 PLK4O00444 970 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 KRIT1O00522 736 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 GDF9O60383 454 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 POP4O95707 220 aaKnown RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 SERPINF2P08697 491 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 KRT7P08729 469 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 AMPD1P23109 780 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 IL1R2P27930 398 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 MAPK8P45983 427 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 PAPOLAP51003 745 aaKnown RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 CDH6P55285 790 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 RHOAP61586 193 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 ARF5P84085 180 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 SERINC3Q13530 473 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 TEAD4Q15561 434 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 UAP1L1Q3KQV9 507 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 TMCO3Q6UWJ1 677 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 DPY19L3Q6ZPD9 716 aa10.26□□□□□ -0.77
BRCA1-227ENST00000591849 ADAT2Q7Z6V5 191 aaKnown RBP10.26□□□□□ -0.77
BRCA1-227ENST00000591849 CCDC170Q8IYT3 715 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms