RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NADSYN1Q6IA69 706 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 NAPEPLDQ6IQ20 393 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 TTI2Q6NXR4 508 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 LAYNQ6UX15 382 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 ENOSF1Q7L5Y1 443 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 CFAP52Q8N1V2 620 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 MFSD2AQ8NA29 543 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 WFDC5Q8TCV5 224 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 SAP25Q8TEE9 199 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 NELFBQ8WX92 580 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 OR8D1Q8WZ84 308 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 SLC39A13Q96H72 371 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 LMLNQ96KR4 655 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 MRGPRX3Q96LB0 322 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 CCDC114Q96M63 670 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 PRICKLE1Q96MT3 831 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-226ENST00000591534 UBL7Q96S82 380 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-226ENST00000591534 ORAI3Q9BRQ5 295 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 NRSN2Q9GZP1 204 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 NUCKS1Q9H1E3 243 aaKnown RBP9.71□□□□□ -0.86
BRCA1-226ENST00000591534 THAP9Q9H5L6 903 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 TMEM51Q9NW97 253 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 DMGDHQ9UI17 866 aaKnown RBP9.71□□□□□ -0.86
BRCA1-226ENST00000591534 SLC25A13Q9UJS0 675 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 SLCO1B1Q9Y6L6 691 aa9.71□□□□□ -0.86
BRCA1-226ENST00000591534 A0A1B0GVM2 712 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 TCAF2A6NFQ2 919 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 KCNU1A8MYU2 1149 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 PLK4O00444 970 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 ALOX15BO15296 676 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 RNGTTO60942 597 aaKnown RBP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 CALCAP01258 141 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 GLI1P08151 1106 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 TPM1P09493 284 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 CKMT2P17540 419 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 MZF1P28698 734 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 EPHA8P29322 1005 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 CCR1P32246 355 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 GPD2P43304 727 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 NXPH1P58417 271 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 E2F1Q01094 437 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 ACCSLQ4AC99 568 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 SETMARQ53H47 684 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 KCNT1Q5JUK3 1230 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 RAP1GAP2Q684P5 730 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 SARM1Q6SZW1 724 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 RRAGAQ7L523 313 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 TAC4Q86UU9 113 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 GATAD2AQ86YP4 633 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 CACTIN-AS1Q8N1I8 211 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 STK40Q8N2I9 435 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 EID2Q8N6I1 236 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 CLEC4CQ8WTT0 213 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 NOX5Q96PH1 765 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 MTG2Q9H4K7 406 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 RUBCNLQ9H714 662 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 FAM204AQ9H8W3 233 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 NEUROD4Q9HD90 331 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 SERGEFQ9UGK8 458 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 SLCO3A1Q9UIG8 710 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 INTS6Q9UL03 887 aaKnown RBP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 NAALADL1Q9UQQ1 740 aa9.7□□□□□ -0.86
BRCA1-226ENST00000591534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCA1-226ENST00000591534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 A0A1W2PNR3 127 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 A0A1W2PR77 199 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 CAPN8A6NHC0 703 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 PRAMEF26H0Y7S4 382 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 TGFBR3LH3BV60 316 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 RNF225M0QZC1 329 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 LATO43561 262 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 TRUB2O95900 331 aaKnown RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 AFPP02771 609 aaKnown RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 ACTN2P35609 894 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 RPL34P49207 117 aaKnown RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 IDH3AP50213 366 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 PLK1P53350 603 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 KRT83P78385 493 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 C19orf57Q0VDD7 668 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 TARDBPQ13148 414 aaKnown RBP eCLIP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 ZNF177Q13360 481 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 CKAP5Q14008 2032 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 DPCR1Q3MIW9 517 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 ZC3H12AQ5D1E8 599 aaKnown RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 FSCBQ5H9T9 825 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 EFHC1Q5JVL4 640 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 PRAMEF14Q5SWL7 426 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 ACBD5Q5T8D3 534 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 MMS22LQ6ZRQ5 1243 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 TMEM110Q86TL2 294 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 AADATQ8N5Z0 425 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 LSM14AQ8ND56 463 aaKnown RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 PTPRN2Q92932 1015 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 KAT5Q92993 513 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 RPL10LQ96L21 214 aaKnown RBP9.69□□□□□ -0.86
BRCA1-226ENST00000591534 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 PREBQ9HCU5 417 aa9.69□□□□□ -0.86
BRCA1-226ENST00000591534 ATP13A2Q9NQ11 1180 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms