RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ANLNQ9NQW6 1124 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 PIGVQ9NUD9 493 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 TAB2Q9NYJ8 693 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 SLC25A13Q9UJS0 675 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 NYNRINQ9P2P1 1898 aaKnown RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 LAMA5O15230 3695 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 TP53BP1Q12888 1972 aaPredicted RBP10.66□□□□□ -0.7
VPS4B-207ENST00000591519 DOCK9Q9BZ29 2069 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 IGLV3-10A0A075B6K4 115 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 SYNJ2BP-COX16A0A087WUM0 186 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 SYCE3A1L190 88 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 C1QTNF3-AMACRE9PGA6 284 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 PRAMEF26H0Y7S4 382 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 ENC1O14682 589 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 MAGEC1O60732 1142 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 RTN2O75298 545 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 CNTN5O94779 1100 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 ADCY5O95622 1261 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 MT-CO1P00395 513 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 EPHA8P29322 1005 aaPredicted RBP10.66□□□□□ -0.7
VPS4B-207ENST00000591519 TAS2R38P59533 333 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 KRT83P78385 493 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 CYP4F3Q08477 520 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 CCDC15Q0P6D6 951 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 KCNMA1Q12791 1236 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 CNTN1Q12860 1018 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 BNIP3Q12983 259 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 ANO6Q4KMQ2 910 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 VWA3BQ502W6 1294 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 ALFQ53S48 1182 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 MIIPQ5JXC2 388 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 ARCQ7LC44 396 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 MARCH9Q86YJ5 346 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 AOPEPQ8N6M6 819 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 TMIEQ8NEW7 156 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 OR2A12Q8NGT7 310 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 CNDP2Q96KP4 475 aaKnown RBP10.66□□□□□ -0.7
VPS4B-207ENST00000591519 PSMB7Q99436 277 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 TUBGCP2Q9BSJ2 902 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 C2orf49Q9BVC5 232 aaPredicted RBP10.66□□□□□ -0.7
VPS4B-207ENST00000591519 REPIN1Q9BWE0 567 aaKnown RBP10.66□□□□□ -0.7
VPS4B-207ENST00000591519 NAA15Q9BXJ9 866 aaKnown RBP10.66□□□□□ -0.7
VPS4B-207ENST00000591519 TKTL2Q9H0I9 626 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 SIK2Q9H0K1 926 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 FANCLQ9NW38 375 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 COX16Q9P0S2 106 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 VPS28Q9UK41 221 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 STAP1Q9ULZ2 295 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 PAXBP1Q9Y5B6 917 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 ATRXP46100 2492 aa10.66□□□□□ -0.7
VPS4B-207ENST00000591519 A0A087WV48 116 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 FAM149AA5PLN7 773 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 PLK4O00444 970 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 CTSLP07711 333 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 SRCP12931 536 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 CYP11B1P15538 503 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 ZNF18P17022 549 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 JUNDP17535 347 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
VPS4B-207ENST00000591519 ACADVLP49748 655 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 ILKQ13418 452 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 STAT4Q14765 748 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 DRAP1Q14919 205 aaPredicted RBP10.65□□□□□ -0.7
VPS4B-207ENST00000591519 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 TCP11X2Q5H9J9 407 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 CT47A1Q5JQC4 288 aaPredicted RBP10.65□□□□□ -0.7
VPS4B-207ENST00000591519 PIP5KL1Q5T9C9 394 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 KLHDC7AQ5VTJ3 777 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 LRRC31Q6UY01 552 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 ZNF783Q6ZMS7 281 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 Q6ZVU0 165 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 EID2Q8N6I1 236 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 DCAF4L2Q8NA75 395 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 TMEM145Q8NBT3 493 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 ENOX1Q8TC92 643 aaKnown RBP10.65□□□□□ -0.7
VPS4B-207ENST00000591519 HAPLN3Q96S86 360 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 VPS16Q9H269 839 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 SYNCQ9H7C4 482 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 ZNF212Q9UDV6 495 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 TMEM59LQ9UK28 342 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 RAXQ9Y2V3 346 aa10.65□□□□□ -0.7
VPS4B-207ENST00000591519 A0A0D9SEW6 157 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 CXorf51AA0A1B0GTR3 108 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 ILVBLA1L0T0 632 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 CBX4O00257 560 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 SNAP91O60641 907 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 RFPL3O75679 317 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 ENDOD1O94919 500 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 LSM8O95777 96 aaKnown RBP10.64□□□□□ -0.71
VPS4B-207ENST00000591519 RHOCP08134 193 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 PNMA6AP0CW24 399 aaPredicted RBP10.64□□□□□ -0.71
VPS4B-207ENST00000591519 JUPP14923 745 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 CKMT2P17540 419 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 MAT2AP31153 395 aaKnown RBP10.64□□□□□ -0.71
VPS4B-207ENST00000591519 CHRNA3P32297 505 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 NUMBP49757 651 aa10.64□□□□□ -0.71
VPS4B-207ENST00000591519 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms