RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 TRUB2O95900 331 aaKnown RBP17.75■□□□□ 0.43
RETREG3-210ENST00000590541 OXCT1P55809 520 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 ZNF177Q13360 481 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-210ENST00000590541 FZD2Q14332 565 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 ZSCAN23Q3MJ62 389 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 LINC00303Q3SY05 128 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 TTC39BQ5VTQ0 682 aaPredicted RBP17.75■□□□□ 0.43
RETREG3-210ENST00000590541 SEL1L3Q68CR1 1132 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 CRTC1Q6UUV9 634 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 CLEC17AQ6ZS10 378 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 EFL1Q7Z2Z2 1120 aaKnown RBP17.75■□□□□ 0.43
RETREG3-210ENST00000590541 LURAP1LQ8IV03 231 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 ATP6V0D2Q8N8Y2 350 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 KAT5Q92993 513 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 FAM117AQ9C073 453 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 CNTN6Q9UQ52 1028 aa17.75■□□□□ 0.43
RETREG3-210ENST00000590541 EME2A4GXA9 379 aaPredicted RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 TERTO14746 1132 aaKnown RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 CASC3O15234 703 aaKnown RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 SART1O43290 800 aaKnown RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 CSF2P04141 144 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 GPD2P43304 727 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 IRAK1P51617 712 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 CENPCQ03188 943 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 MEA1Q16626 185 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 TMEM259Q4ZIN3 620 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 FBXL22Q6P050 247 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 FOXR1Q6PIV2 292 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 RBM44Q6ZP01 1051 aaKnown RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 CCNL2Q96S94 520 aaPredicted RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 CLSTN2Q9H4D0 955 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 ST7Q9NRC1 585 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 KLF15Q9UIH9 416 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 HEMK1Q9Y5R4 338 aaPredicted RBP17.74■□□□□ 0.43
RETREG3-210ENST00000590541 CSNK1G3Q9Y6M4 447 aa17.74■□□□□ 0.43
RETREG3-210ENST00000590541 GTPBP10A4D1E9 387 aaKnown RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 POM121BA6NF01 834 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 KPNA3O00505 521 aaPredicted RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 TNFSF15O95150 251 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 PCDH8O95206 1070 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 MT-CO1P00395 513 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 SRCP12931 536 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 NME1P15531 152 aaKnown RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 CHRNA3P32297 505 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 PDX1P52945 283 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 DRAP1Q14919 205 aaPredicted RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 COLEC12Q5KU26 742 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 RABGAP1LQ5R372 815 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 PERM1Q5SV97 790 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 RRAGAQ7L523 313 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 PTAR1Q7Z6K3 402 aaPredicted RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 DCP2Q8IU60 420 aaKnown RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 ARL14Q8N4G2 192 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 TMIEQ8NEW7 156 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 OR2A12Q8NGT7 310 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 WDR36Q8NI36 951 aaKnown RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 FAM174AQ8TBP5 190 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 PPP1R9BQ96SB3 815 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 INTS2Q9H0H0 1204 aaKnown RBP17.73■□□□□ 0.43
RETREG3-210ENST00000590541 POPDC2Q9HBU9 364 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 DACH1Q9UI36 760 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 SALL4Q9UJQ4 1053 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 VPS28Q9UK41 221 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 HS3ST3A1Q9Y663 406 aa17.73■□□□□ 0.43
RETREG3-210ENST00000590541 SPTY2D1-AS1A0A0U1RR47 76 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 MED7O43513 233 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 TCEA3O75764 348 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 MLLT3P42568 568 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 NFKB2Q00653 900 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 CCDC15Q0P6D6 951 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 FGL2Q14314 439 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 TPD52L1Q16890 204 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 DEFB133Q30KQ1 61 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 CT47A1Q5JQC4 288 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 KYAT3Q6YP21 454 aaKnown RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 ERN2Q76MJ5 926 aaKnown RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 PARGQ86W56 976 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 FAM114A1Q8IWE2 563 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 TPCN2Q8NHX9 752 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 RPRD1AQ96P16 312 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 TRIM62Q9BVG3 475 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 STARD5Q9NSY2 213 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 NCKIPSDQ9NZQ3 722 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 SLC12A6Q9UHW9 1150 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 ATXN7L1Q9ULK2 861 aaPredicted RBP17.72■□□□□ 0.43
RETREG3-210ENST00000590541 HS3ST2Q9Y278 367 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 KIF26BQ2KJY2 2108 aa17.72■□□□□ 0.43
RETREG3-210ENST00000590541 H3BM21 787 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 K7ERQ8 282 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 RAD51BO15315 384 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 AQP9O43315 295 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 ITGA2BP08514 1039 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.43
RETREG3-210ENST00000590541 ACADSBP45954 432 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 YWHAZP63104 245 aaKnown RBP17.71■□□□□ 0.43
RETREG3-210ENST00000590541 TPRG1LQ5T0D9 272 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 C6orf132Q5T0Z8 1188 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 ARHGEF19Q8IW93 802 aa17.71■□□□□ 0.43
RETREG3-210ENST00000590541 CHST14Q8NCH0 376 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms