RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	KLHL11	Q9NVR0	708 aa		13.64	□□□□□ -0.23
PKN1-211	ENST00000588200	NOCT	Q9UK39	431 aa	Known RBP	13.64	□□□□□ -0.23
PKN1-211	ENST00000588200	RALY	Q9UKM9	306 aa	Known RBP	13.64	□□□□□ -0.23
PKN1-211	ENST00000588200	HS3ST3A1	Q9Y663	406 aa		13.64	□□□□□ -0.23
PKN1-211	ENST00000588200	TRPM6	Q9BX84	2022 aa		13.64	□□□□□ -0.23
PKN1-211	ENST00000588200	PLK4	O00444	970 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	RIOK3	O14730	519 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	HNRNPA2B1	P22626	353 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	HNF1B	P35680	557 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	PTPN9	P43378	593 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	SERPINH1	P50454	418 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	JAM2	P57087	298 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	CDR2	Q01850	454 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	ZNF211	Q13398	564 aa	Predicted RBP	13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	RTP5	Q14D33	572 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	PROX2	Q3B8N5	592 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	CDKAL1	Q5VV42	579 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	C22orf39	Q6P5X5	142 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	RBM43	Q6ZSC3	357 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	STRADA	Q7RTN6	431 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	EID2	Q8N6I1	236 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	ASB12	Q8WXK4	309 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	ARRDC3	Q96B67	414 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	KLHDC7B	Q96G42	594 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	LRIG1	Q96JA1	1093 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	NRSN2	Q9GZP1	204 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	GAN	Q9H2C0	597 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	MPP6	Q9NZW5	540 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	IL36A	Q9UHA7	158 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	WASF2	Q9Y6W5	498 aa		13.63	□□□□□ -0.23
PKN1-211	ENST00000588200	MYLK	Q15746	1914 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	BAHCC1	Q9P281	2608 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200		A0A1W2PQU0	124 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	LRRC10B	A6NIK2	292 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	GOLGA8CP	A6NN73	597 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200		K7ERQ8	282 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	KPNA3	O00505	521 aa	Predicted RBP	13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	CD160	O95971	181 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	MME	P08473	750 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	UNG	P13051	313 aa	Predicted RBP	13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	RRM1	P23921	792 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	ITGB7	P26010	798 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	MAT2A	P31153	395 aa	Known RBP	13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	ADRA1B	P35368	520 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	MAPKAPK2	P49137	400 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	KIAA1161	Q6NSJ0	714 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	TRIM72	Q6ZMU5	477 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	DPY19L3	Q6ZPD9	716 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	NLRP14	Q86W24	1093 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	SLC25A45	Q8N413	288 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	CFAP57	Q96MR6	1250 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	LENG8	Q96PV6	779 aa	Predicted RBP	13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	DYRK4	Q9NR20	520 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	KALRN	O60229	2985 aa		13.62	□□□□□ -0.23
PKN1-211	ENST00000588200	C2CD4B	A6NLJ0	364 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	LEFTY1	O75610	366 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	THEGL	P0DJG4	465 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	GIMD1	P0DJR0	217 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	JUP	P14923	745 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	RHOQ	P17081	205 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	AKT2	P31751	481 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	L1CAM	P32004	1257 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	RECQL	P46063	649 aa	Predicted RBP	13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	NEK3	P51956	506 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	GEMIN4	P57678	1058 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	ARF5	P84085	180 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	E2F1	Q01094	437 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	FMO1	Q01740	532 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	GNA12	Q03113	381 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	CYP4F3	Q08477	520 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	PTP4A2	Q12974	167 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	DNAJC3	Q13217	504 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	ARL13B	Q3SXY8	428 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	CARD16	Q5EG05	197 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	ARSI	Q5FYB1	569 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	TAF3	Q5VWG9	929 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	TFAP2D	Q7Z6R9	452 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	FAM131B	Q86XD5	332 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	FAM181A	Q8N9Y4	354 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	CHST14	Q8NCH0	376 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	OR7D4	Q8NG98	312 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	OR4C6	Q8NH72	309 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	CPA5	Q8WXQ8	436 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	NTAN1	Q96AB6	310 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	RAB7B	Q96AH8	199 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	VOPP1	Q96AW1	172 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	NXPE2	Q96DL1	559 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	HEPH	Q9BQS7	1158 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	MAGEH1	Q9H213	219 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	TMPRSS4	Q9NRS4	437 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	TMEM248	Q9NWD8	314 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	OR12D3	Q9UGF7	316 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	ZFR2	Q9UPR6	939 aa	Known RBP	13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	NEU3	Q9UQ49	428 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	RAX	Q9Y2V3	346 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	SNX10	Q9Y5X0	201 aa		13.61	□□□□□ -0.23
PKN1-211	ENST00000588200	FASN	P49327	2511 aa	Known RBP	13.6	□□□□□ -0.23
PKN1-211	ENST00000588200	RNF103	O00237	685 aa		13.6	□□□□□ -0.23
PKN1-211	ENST00000588200	CBX4	O00257	560 aa		13.6	□□□□□ -0.23
PKN1-211	ENST00000588200	LZTS3	O60299	673 aa	Predicted RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms