RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 OR13H1Q8NG92 308 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 C1orf74Q96LT6 269 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 NPY6RQ99463 290 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 CALN1Q9BXU9 219 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 SYNCQ9H7C4 482 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 FZD3Q9NPG1 666 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 ANLNQ9NQW6 1124 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 TMEM51Q9NW97 253 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 ZFR2Q9UPR6 939 aaKnown RBP14.38□□□□□ -0.11
DNMT1-213ENST00000587604 PCDHB1Q9Y5F3 818 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 HS3ST3A1Q9Y663 406 aa14.38□□□□□ -0.11
DNMT1-213ENST00000587604 RP1P56715 2156 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 A0A0D9SEW6 157 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 I6L893 689 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 RNF103O00237 685 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 OPA1O60313 960 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 GP1BAP07359 652 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 PON1P27169 355 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 RECQLP46063 649 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 CLDN2P57739 230 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 PTPN20Q4JDL3 420 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 TMEM259Q4ZIN3 620 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 ARSIQ5FYB1 569 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 ACBD5Q5T8D3 534 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 OTUD1Q5VV17 481 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 LRRC31Q6UY01 552 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 GCNT7Q6ZNI0 430 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 Q6ZSR6 202 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 SLC22A18ASQ8N1D0 253 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 FAM181AQ8N9Y4 354 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 CHST14Q8NCH0 376 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 ZNF248Q8NDW4 579 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 NT5C3BQ969T7 300 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 PGAP3Q96FM1 320 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 PPP1R16AQ96I34 528 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 APOLD1Q96LR9 279 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 ZNF578Q96N58 590 aaPredicted RBP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 DUSP23Q9BVJ7 150 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 USP29Q9HBJ7 922 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.37□□□□□ -0.11
DNMT1-213ENST00000587604 NLGN3Q9NZ94 848 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 IL36AQ9UHA7 158 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 STAP1Q9ULZ2 295 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 PAXBP1Q9Y5B6 917 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 ATMQ13315 3056 aa14.37□□□□□ -0.11
DNMT1-213ENST00000587604 ASH1LQ9NR48 2969 aaKnown RBP14.36□□□□□ -0.11
DNMT1-213ENST00000587604 IGLV3-10A0A075B6K4 115 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 A6NNZ2 444 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 FOXN3O00409 490 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-213ENST00000587604 SCAMP1O15126 338 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 TFE3P19532 575 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-213ENST00000587604 OR1E1P30953 314 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 CLCN1P35523 988 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 DUSP3P51452 185 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-213ENST00000587604 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
DNMT1-213ENST00000587604 RPS21P63220 83 aaKnown RBP14.36□□□□□ -0.11
DNMT1-213ENST00000587604 SLC20A2Q08357 652 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 SEL1L3Q68CR1 1132 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 C22orf39Q6P5X5 142 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 LINGO4Q6UY18 593 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 DPY19L3Q6ZPD9 716 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 SLC47A2Q86VL8 602 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 HIC2Q96JB3 615 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 BMFQ96LC9 184 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 DEPDC7Q96QD5 511 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 LGMNQ99538 433 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 SLC17A9Q9BYT1 436 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 ABCG4Q9H172 646 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 EVA1BQ9NVM1 165 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 MPP6Q9NZW5 540 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 SNX10Q9Y5X0 201 aa14.36□□□□□ -0.11
DNMT1-213ENST00000587604 ILVBLA1L0T0 632 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 K7ESM1 405 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 ZNF821O75541 412 aaPredicted RBP14.35□□□□□ -0.11
DNMT1-213ENST00000587604 LEFTY1O75610 366 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 DXOO77932 396 aaKnown RBP14.35□□□□□ -0.11
DNMT1-213ENST00000587604 PAK4O96013 591 aaPredicted RBP14.35□□□□□ -0.11
DNMT1-213ENST00000587604 MPOP05164 745 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 LSSP48449 732 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 SULT1E1P49888 294 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 NEK3P51956 506 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 PCBP4P57723 403 aaKnown RBP14.35□□□□□ -0.11
DNMT1-213ENST00000587604 HNRNPKP61978 463 aaKnown RBP eCLIP14.35□□□□□ -0.11
DNMT1-213ENST00000587604 CXADRP78310 365 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 DEUP1Q05D60 604 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 SLC25A52Q3SY17 297 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 KIAA1161Q6NSJ0 714 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 RETSATQ6NUM9 610 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 ZNF783Q6ZMS7 281 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 TFAP2DQ7Z6R9 452 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 GRIN3AQ8TCU5 1115 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 CEP44Q9C0F1 390 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 CAAP1Q9H8G2 361 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 GPR27Q9NS67 375 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 DNAJC28Q9NX36 388 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 DNAJC12Q9UKB3 198 aa14.35□□□□□ -0.11
DNMT1-213ENST00000587604 WASF2Q9Y6W5 498 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms