RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CHRNB1P11230 501 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 TARSP26639 723 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 STIP1P31948 543 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 NNMTP40261 264 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 ST8SIA6P61647 398 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 MRPS21P82921 87 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 SLC10A7Q0GE19 358 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 SNX1Q13596 522 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 LRRC32Q14392 662 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF234Q14588 700 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 HSF5Q4G112 596 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 MARC1Q5VT66 337 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 ATP11CQ8NB49 1132 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 ISG20Q96AZ6 181 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 ZNF419Q96HQ0 510 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 PSKH2Q96QS6 385 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 TMEM121Q9BTD3 319 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 TMEM245Q9H330 911 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 SEPT3Q9UH03 358 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 ACTL7AQ9Y615 435 aa17.27■□□□□ 0.36
PRKCSH-203ENST00000586486 BDP1A6H8Y1 2624 aa17.27■□□□□ 0.35
PRKCSH-203ENST00000586486 KCNN4O15554 427 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 PTPN3P26045 913 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 COILP38432 576 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 HSPA9P38646 679 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 MMP13P45452 471 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 LMNB2Q03252 620 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 WASHC5Q12768 1159 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 ZBTB17Q13105 803 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 FNDC3BQ53EP0 1204 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 TTC27Q6P3X3 843 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 C22orf39Q6P5X5 142 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 CCDC137Q6PK04 289 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 LEKR1Q6ZMV7 388 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 B4GALNT4Q76KP1 1039 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 TRMT11Q7Z4G4 463 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 BBS5Q8N3I7 341 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 USP33Q8TEY7 942 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 FRS2Q8WU20 508 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 C10orf88Q9H8K7 445 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 RBM12Q9NTZ6 932 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 SLCO3A1Q9UIG8 710 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 SLC8A2Q9UPR5 921 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 ZNF148Q9UQR1 794 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 CKAP5Q14008 2032 aa17.26■□□□□ 0.35
PRKCSH-203ENST00000586486 K7ERQ8 282 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 RNF103O00237 685 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 SMAD6O43541 496 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 RNF40O75150 1001 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 STK10O94804 968 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ALADP13716 330 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 SEC13P55735 322 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ZNF235Q14590 738 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 UBXN2BQ14CS0 331 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 CYTH1Q15438 398 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 TEX44Q53QW1 395 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 EMC10Q5UCC4 262 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ALLCQ8N6M5 410 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 PCDH20Q8N6Y1 951 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 MNS1Q8NEH6 495 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ATL2Q8NHH9 583 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 SLCO2A1Q92959 643 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 RUNDC3BQ96NL0 473 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 CINPQ9BW66 212 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 DDX47Q9H0S4 455 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 HAUS2Q9NVX0 235 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 LHX3Q9UBR4 397 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 PCYOX1Q9UHG3 505 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 TRHDEQ9UKU6 1024 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 FCF1Q9Y324 198 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 MYO18AQ92614 2054 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ANTXRLA6NF34 631 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 C5orf60A6NFR6 353 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ZNF821O75541 412 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 IL12RB1P42701 662 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 KCNJ1P48048 391 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 GDF10P55107 478 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 FZD5Q13467 585 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 DLG2Q15700 870 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 HNRNPA1L2Q32P51 320 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ALG1LQ6GMV1 187 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 SERPINA13PQ6UXR4 307 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 TRIM67Q6ZTA4 783 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 PLPP6Q8IY26 295 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 CHPFQ8IZ52 775 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 FAM71DQ8N9W8 422 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 IL17RCQ8NAC3 791 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 PJA1Q8NG27 643 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 GRK7Q8WTQ7 553 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 TEKT5Q96M29 485 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 MGME1Q9BQP7 344 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 FOXQ1Q9C009 403 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 RBM22Q9NW64 420 aaKnown RBP eCLIP17.25■□□□□ 0.355e-7■■■■□ 23.5
PRKCSH-203ENST00000586486 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 FEZ2Q9UHY8 353 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 STON1Q9Y6Q2 735 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
PRKCSH-203ENST00000586486 FAM170BA6NMN3 283 aa17.24■□□□□ 0.35
PRKCSH-203ENST00000586486 TTC34A8MYJ7 566 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms