RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 EOMESO95936 686 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PRKCGP05129 697 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 URODP06132 367 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 NCF1P14598 390 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 SERPINB5P36952 375 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 CD151P48509 253 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 GLUD2P49448 558 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 GRM3Q14832 879 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TAF11Q15544 211 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 VWA5B1Q5TIE3 1220 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 AGGF1Q8N302 714 aaeCLIP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TM6SF2Q9BZW4 377 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TMEM161AQ9NX61 479 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 RLFQ13129 1914 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 KIF13BQ9NQT8 1826 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 DCLK1O15075 740 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 HOXA2O43364 376 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TYMPP19971 482 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 CNTFP26441 200 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 CASP2P42575 452 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PGFP49763 221 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 KPNA2P52292 529 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 RPS24P62847 133 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TLE2Q04725 743 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PPIDQ08752 370 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 SLC10A7Q0GE19 358 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 CDH18Q13634 790 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PAFAH1B3Q15102 231 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TAZQ16635 292 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 LRRC36Q1X8D7 754 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 PCID2Q5JVF3 399 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 LINGO4Q6UY18 593 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TPGS1Q6ZTW0 290 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TMC7Q7Z402 723 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 DDI1Q8WTU0 396 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 IRGQQ8WZA9 623 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 ARL8BQ9NVJ2 186 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 SLC2A6Q9UGQ3 507 aa12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-208ENST00000585799 TTC3P53804 2025 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 TRIP11Q15643 1979 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 NDUFS3O75489 264 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 HLA-DQB2P05538 268 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 BPGMP07738 259 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SOX11P35716 441 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 IRF9Q00978 393 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 PDE1CQ14123 709 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 UBAP2LQ14157 1087 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ALFQ53S48 1182 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 RNF43Q68DV7 783 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 FSTL4Q6MZW2 842 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 HDAC10Q969S8 669 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 TUBB6Q9BUF5 446 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 NMUR2Q9GZQ4 415 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 NOP53Q9NZM5 478 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ENPP3O14638 875 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SUPT7LO94864 414 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 UNC5CO95185 931 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ATP6V1G2O95670 118 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SERPINE1P05121 402 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 MLNP12872 115 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 RAG1P15918 1043 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 WEE1P30291 646 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 TM4SF4P48230 202 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 PDPK2PQ6A1A2 396 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ACAD11Q709F0 780 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 FCRL3Q96P31 734 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 THAP1Q9NVV9 213 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 IGSF9Q9P2J2 1179 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 PRKAG2Q9UGJ0 569 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 FBXO5Q9UKT4 447 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 MAGEB16A2A368 324 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 E5RI56 91 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 AP3B1O00203 1094 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 SERPINF2P08697 491 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 OCRLQ01968 901 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 TSTA3Q13630 321 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 IKBKEQ14164 716 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 RNF19BQ6ZMZ0 732 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ANKS3Q6ZW76 656 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 MARK4Q96L34 752 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 TBC1D10AQ9BXI6 508 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 NUF2Q9BZD4 464 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 ZMYND8Q9ULU4 1186 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-208ENST00000585799 OR51F1A6NGY5 319 aa12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
SMARCA4-208ENST00000585799 AMHP03971 560 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms