RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CCDC6Q16204 474 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TEX44Q53QW1 395 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 RNF219Q5W0B1 726 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 SLC9A4Q6AI14 798 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 OTOAQ7RTW8 1153 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 NPAS4Q8IUM7 802 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TBATAQ96M53 351 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 ACSS3Q9H6R3 686 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 CNOT10Q9H9A5 744 aaKnown RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 TLR8Q9NR97 1041 aaKnown RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 Q9Y3F1 56 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 WDR90Q96KV7 1748 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 PLXNA1Q9UIW2 1896 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 KRT87PA6NCN2 255 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 ATF6P18850 670 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 AQP5P55064 265 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 BST1Q10588 318 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TAF1BQ53T94 588 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 FAM109BQ6ICB4 259 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 TRPM8Q7Z2W7 1104 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 CCDC91Q7Z6B0 441 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 GSDMBQ8TAX9 411 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TMEM174Q8WUU8 243 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 BADQ92934 168 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 SIGLEC10Q96LC7 697 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 CASD1Q96PB1 797 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 PIDD1Q9HB75 910 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 PNPOQ9NVS9 261 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 MARCH5Q9NX47 278 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TMEM216Q9P0N5 145 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 ITM2AO43736 263 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 FBXO21O94952 628 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 ALPIP09923 528 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 MZF1P28698 734 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 ATP5C1P36542 298 aaKnown RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 SKOR1P84550 965 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 MS4A13Q5J8X5 152 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 FYB2Q5VWT5 728 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 FITM2Q8N6M3 262 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TTC28Q96AY4 2481 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TSNARE1Q96NA8 513 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 EBF4Q9BQW3 602 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TLE6Q9H808 572 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 PSD3Q9NYI0 1048 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TRPM5Q9NZQ8 1165 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 PCDHB9Q9Y5E1 797 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 TEX264Q9Y6I9 313 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 FRYLO94915 3013 aa10.45□□□□□ -0.74
RFFL-212ENST00000584655 RP1L1Q8IWN7 2480 aaPredicted RBP10.45□□□□□ -0.74
RFFL-212ENST00000584655 A0A096LPK6 155 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 TMEM233B4DJY2 109 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 MTX2O75431 263 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 PDHA1P08559 390 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 MX2P20592 715 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 CTNNB1P35222 781 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 STK19P49842 368 aaPredicted RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 MPP3Q13368 585 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 TRIM71Q2Q1W2 868 aaKnown RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 LGSNQ5TDP6 509 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 SLC39A5Q6ZMH5 540 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 DET1Q7L5Y6 550 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 DNAJB7Q7Z6W7 309 aaPredicted RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 MON1AQ86VX9 555 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 DCAKDQ8WVC6 231 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 QKIQ96PU8 341 aaKnown RBP eCLIP10.44□□□□□ -0.743e-7■■■□□ 18.5
RFFL-212ENST00000584655 WDR55Q9H6Y2 383 aaPredicted RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 CD84Q9UIB8 345 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 CPQQ9Y646 472 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 MUC3AQ02505 3323 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 HIDE1A8MVS5 230 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 ZNF623O75123 536 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 C1RP00736 705 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 CDKN1CP49918 316 aaPredicted RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 NAGLUP54802 743 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 UBAP2LQ14157 1087 aaKnown RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 DSC3Q14574 896 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 GRM3Q14832 879 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 VEPH1Q14D04 833 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 USP41Q3LFD5 358 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 ZRANB3Q5FWF4 1079 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 FSCBQ5H9T9 825 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 RBM20Q5T481 1227 aaKnown RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 CNSTQ6PJW8 725 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 ZDHHC17Q8IUH5 632 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 C10orf107Q8IVU9 208 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 CMTM8Q8IZV2 173 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 CFAP61Q8NHU2 1237 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 CLPTM1LQ96KA5 538 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 LRRC37BQ96QE4 947 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 SLC38A8A6NNN8 435 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 HAUS5O94927 633 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 RGRP47804 291 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 MAPRE1Q15691 268 aaKnown RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 MAP3K21Q5TCX8 1036 aa10.44□□□□□ -0.74
RFFL-212ENST00000584655 PSTKQ8IV42 348 aaKnown RBP10.44□□□□□ -0.74
RFFL-212ENST00000584655 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.44□□□□□ -0.74
RFFL-212ENST00000584655 CERS2Q96G23 380 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms