RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 KRBA1A5PL33 1030 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 K7EQS6 105 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 RNF103O00237 685 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 SRCP12931 536 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 CD72P21854 359 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 KCNJ1P48048 391 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 STK19P49842 368 aaPredicted RBP18.64■□□□□ 0.57
RFFL-211ENST00000584541 SEC13P55735 322 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 C2orf54Q08AI8 447 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 LRRC32Q14392 662 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 ACCSLQ4AC99 568 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 DGKKQ5KSL6 1271 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 TRMT11Q7Z4G4 463 aaKnown RBP18.64■□□□□ 0.57
RFFL-211ENST00000584541 SFTPA1Q8IWL2 248 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 ZNF513Q8N8E2 541 aaPredicted RBP18.64■□□□□ 0.57
RFFL-211ENST00000584541 CCDC89Q8N998 374 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 FAM71DQ8N9W8 422 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 USP33Q8TEY7 942 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 CEP44Q9C0F1 390 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 L2HGDHQ9H9P8 463 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 RBM22Q9NW64 420 aaKnown RBP eCLIP18.64■□□□□ 0.572e-7■■■■□ 22.2
RFFL-211ENST00000584541 KLHL8Q9P2G9 620 aaPredicted RBP18.64■□□□□ 0.57
RFFL-211ENST00000584541 AMACRQ9UHK6 382 aa18.64■□□□□ 0.57
RFFL-211ENST00000584541 KANSL1LA0AUZ9 987 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 STK25O00506 426 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 TMCC1O94876 653 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 GAS8O95995 478 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 PEX11BO96011 259 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 MT-CO1P00395 513 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 JCHAINP01591 159 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 HNRNPLP14866 589 aaKnown RBP eCLIP18.63■□□□□ 0.57
RFFL-211ENST00000584541 HSPA9P38646 679 aaKnown RBP18.63■□□□□ 0.57
RFFL-211ENST00000584541 MRPS21P82921 87 aaKnown RBP18.63■□□□□ 0.57
RFFL-211ENST00000584541 SLC10A7Q0GE19 358 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 ZNF234Q14588 700 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 UBXN2BQ14CS0 331 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 PTPRNQ16849 979 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 TEX44Q53QW1 395 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 EGFLAMQ63HQ2 1017 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 SDE2Q6IQ49 451 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 TTC27Q6P3X3 843 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 SERPINA13PQ6UXR4 307 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 TEX26Q8N6G2 289 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 ALLCQ8N6M5 410 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 MRGPRX3Q96LB0 322 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 KRT12Q99456 494 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 IL12RB2Q99665 862 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 COL25A1Q9BXS0 654 aaPredicted RBP18.63■□□□□ 0.57
RFFL-211ENST00000584541 USP29Q9HBJ7 922 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 THAP10Q9P2Z0 257 aaPredicted RBP18.63■□□□□ 0.57
RFFL-211ENST00000584541 TRHDEQ9UKU6 1024 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 ACTL7AQ9Y615 435 aa18.63■□□□□ 0.57
RFFL-211ENST00000584541 SHISA7A6NL88 538 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 K7ERQ8 282 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 DCXO43602 365 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 ATP9BO43861 1147 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 ECEL1O95672 775 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 CD160O95971 181 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 IFNB1P01574 187 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 PTPN3P26045 913 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 TIE1P35590 1138 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 RHOAP61586 193 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 SIGLEC14Q08ET2 396 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 CYTH1Q15438 398 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 DLG2Q15700 870 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 P3H1Q32P28 736 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 ITPRIPL1Q6GPH6 555 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 C22orf39Q6P5X5 142 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 PID1Q7Z2X4 250 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 CHPFQ8IZ52 775 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 PCDH20Q8N6Y1 951 aaKnown RBP18.62■□□□□ 0.57
RFFL-211ENST00000584541 EZH1Q92800 747 aaPredicted RBP18.62■□□□□ 0.57
RFFL-211ENST00000584541 EDAQ92838 391 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 ISG20Q96AZ6 181 aaKnown RBP18.62■□□□□ 0.57
RFFL-211ENST00000584541 AGAP3Q96P47 875 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 PSKH2Q96QS6 385 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 CARD6Q9BX69 1037 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 NT5MQ9NPB1 228 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 LTB4R2Q9NPC1 389 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 PCYOX1Q9UHG3 505 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 SLCO3A1Q9UIG8 710 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 FCF1Q9Y324 198 aaKnown RBP18.62■□□□□ 0.57
RFFL-211ENST00000584541 TTLL3Q9Y4R7 772 aa18.62■□□□□ 0.57
RFFL-211ENST00000584541 MYO18AQ92614 2054 aaKnown RBP18.62■□□□□ 0.57
RFFL-211ENST00000584541 ATG2BQ96BY7 2078 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 C5orf60A6NFR6 353 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 SMAD6O43541 496 aaKnown RBP18.61■□□□□ 0.57
RFFL-211ENST00000584541 OPHN1O60890 802 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 KIR2DL1P43626 348 aaPredicted RBP18.61■□□□□ 0.57
RFFL-211ENST00000584541 RECQLP46063 649 aaPredicted RBP18.61■□□□□ 0.57
RFFL-211ENST00000584541 SNRPD1P62314 119 aaKnown RBP18.61■□□□□ 0.57
RFFL-211ENST00000584541 DR1Q01658 176 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 ITKQ08881 620 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 WASHC5Q12768 1159 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 ZBTB17Q13105 803 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 CCINQ13939 588 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 DHX34Q14147 1143 aaKnown RBP18.61■□□□□ 0.57
RFFL-211ENST00000584541 PPP1R7Q15435 360 aa18.61■□□□□ 0.57
RFFL-211ENST00000584541 HSF5Q4G112 596 aaPredicted RBP18.61■□□□□ 0.57
RFFL-211ENST00000584541 C2orf27AQ580R0 203 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms