RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 CLEC14AQ86T13 490 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 OR2A12Q8NGT7 310 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 FEM1CQ96JP0 617 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 CCNL2Q96S94 520 aaPredicted RBP13.67□□□□□ -0.22
COPS3-218ENST00000584216 IL12RB2Q99665 862 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 SLC17A9Q9BYT1 436 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 GPR27Q9NS67 375 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 IL36AQ9UHA7 158 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
COPS3-218ENST00000584216 NYNRINQ9P2P1 1898 aaKnown RBP13.67□□□□□ -0.22
COPS3-218ENST00000584216 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 SYNJ2BP-COX16A0A087WUM0 186 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 CCDC187A0A096LP49 1063 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 FPGTO14772 594 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 HSF2BPO75031 334 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 TNFSF15O95150 251 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 RHOCP08134 193 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 SFTPCP11686 197 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 KRT5P13647 590 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 INHBCP55103 352 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 MAPK8IP2Q13387 824 aaPredicted RBP13.66□□□□□ -0.22
COPS3-218ENST00000584216 STIM1Q13586 685 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 PKP1Q13835 747 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 FZD2Q14332 565 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 ARL13BQ3SXY8 428 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 CCDC40Q4G0X9 1142 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 ZNF542PQ5EBM4 170 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 EFHC1Q5JVL4 640 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 SEL1L3Q68CR1 1132 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 OR6B2Q6IFH4 312 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 GUSBP11Q6P575 273 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 FOXR1Q6PIV2 292 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 KAT5Q92993 513 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.66□□□□□ -0.22
COPS3-218ENST00000584216 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
COPS3-218ENST00000584216 ASNSD1Q9NWL6 643 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 COX16Q9P0S2 106 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
COPS3-218ENST00000584216 ATXN7L1Q9ULK2 861 aaPredicted RBP13.66□□□□□ -0.22
COPS3-218ENST00000584216 ZFR2Q9UPR6 939 aaKnown RBP13.66□□□□□ -0.22
COPS3-218ENST00000584216 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 PSMA7O14818 248 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 SMC2O95347 1197 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 GJB6O95452 261 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 JUNDP17535 347 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 SNX16P57768 344 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 NFATC3Q12968 1075 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 CLN3Q13286 438 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 SGCGQ13326 291 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
COPS3-218ENST00000584216 PDCLQ13371 301 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 PDE1CQ14123 709 aaPredicted RBP13.65□□□□□ -0.22
COPS3-218ENST00000584216 SPIDRQ14159 915 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 ACBD5Q5T8D3 534 aaPredicted RBP13.65□□□□□ -0.22
COPS3-218ENST00000584216 DENND1BQ6P3S1 775 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
COPS3-218ENST00000584216 DCAF4L2Q8NA75 395 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 GRIN3AQ8TCU5 1115 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 LMX1AQ8TE12 382 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 BMFQ96LC9 184 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 TBATAQ96M53 351 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 LENG8Q96PV6 779 aaPredicted RBP13.65□□□□□ -0.22
COPS3-218ENST00000584216 SLC2A13Q96QE2 648 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 ARHGAP9Q9BRR9 750 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 IL17BQ9UHF5 180 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 VPS51Q9UID3 782 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
COPS3-218ENST00000584216 ARID1BQ8NFD5 2236 aaPredicted RBP13.65□□□□□ -0.22
COPS3-218ENST00000584216 POM121BA6NF01 834 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 TMX2-CTNND1H3BSU7 103 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 PYCARD-AS1I3L0S3 204 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 MUSKO15146 869 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 AP1G1O43747 822 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 LETM1O95202 739 aaPredicted RBP13.64□□□□□ -0.23
COPS3-218ENST00000584216 PAK4O96013 591 aaPredicted RBP13.64□□□□□ -0.23
COPS3-218ENST00000584216 CALCAP01258 141 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 ITGB2P05107 769 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 ADRB3P13945 408 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 RRM1P23921 792 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 ITGB7P26010 798 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 PPP1R2P41236 205 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 PITX1P78337 314 aaPredicted RBP13.64□□□□□ -0.23
COPS3-218ENST00000584216 NME3Q13232 169 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 PTK2BQ14289 1009 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 DEFB133Q30KQ1 61 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 C5orf22Q49AR2 442 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
COPS3-218ENST00000584216 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms