RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	ZMPSTE24	O75844	475 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TRIM16	O95361	564 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SERPINC1	P01008	464 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PRNP	P04156	253 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RHOQ	P17081	205 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MAPKAPK2	P49137	400 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF143	P52747	638 aa	Predicted RBP	13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ARF5	P84085	180 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MANEAL	Q5VSG8	457 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	UNQ6494/PRO21346	Q6UXR6	183 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	LEKR1	Q6ZMV7	388 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DPY19L3	Q6ZPD9	716 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF354C	Q86Y25	554 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MCOLN2	Q8IZK6	566 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PYROXD2	Q8N2H3	581 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TMIE	Q8NEW7	156 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	BAP1	Q92560	729 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FAM131C	Q96AQ9	280 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TAS2R14	Q9NYV8	317 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TPX2	Q9ULW0	747 aa	Known RBP	13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	HPCAL4	Q9UM19	191 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	BTBD3	Q9Y2F9	522 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PCNX2	A6NKB5	2137 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	EPG5	Q9HCE0	2579 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	WDFY3	Q8IZQ1	3526 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TCRBV5S1A1T	A0A578	114 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SYCE3	A1L190	88 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TLR4	O00206	839 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CREB3	O43889	395 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RAMP2	O60895	175 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RNGTT	O60942	597 aa	Known RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF821	O75541	412 aa	Predicted RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	LEFTY1	O75610	366 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DES	P17661	470 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	EPHB2	P29323	1055 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ETFB	P38117	255 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TAS2R38	P59533	333 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NRG1	Q02297	640 aa	Predicted RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SLC20A2	Q08357	652 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCDC15	Q0P6D6	951 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	POLD3	Q15054	466 aa	Predicted RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCDC157	Q569K6	752 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CARD16	Q5EG05	197 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	EFHC2	Q5JST6	749 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PIP5KL1	Q5T9C9	394 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SFMBT2	Q5VUG0	894 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NAPEPLD	Q6IQ20	393 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NLRP14	Q86W24	1093 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GATAD2A	Q86YP4	633 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PCDH20	Q8N6Y1	951 aa	Known RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	KLK6	Q92876	244 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ARHGEF2	Q92974	986 aa	Known RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NTAN1	Q96AB6	310 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ARRDC3	Q96B67	414 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PPP1R16A	Q96I34	528 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ELF4	Q99607	663 aa	Predicted RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CDC6	Q99741	560 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MYOC	Q99972	504 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CNPY3	Q9BT09	278 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TM6SF2	Q9BZW4	377 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CEP44	Q9C0F1	390 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PREB	Q9HCU5	417 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GDF3	Q9NR23	364 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TMEM248	Q9NWD8	314 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ARHGAP20	Q9P2F6	1191 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MYO6	Q9UM54	1294 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	APOBEC2	Q9Y235	224 aa	Known RBP	13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NEUROG3	Q9Y4Z2	214 aa		13.9	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TMEM131	Q92545	1883 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186		A0A1B0GTH6	734 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186		A0A1B0GTQ1	180 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186		A0A1W2PQU0	124 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186		A0A1W2PR77	199 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	C10orf142	B7Z368	130 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	SLC31A1	O15431	190 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ATMIN	O43313	823 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PCDHGA12	O60330	932 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	DFNA5	O60443	496 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PCDH8	O95206	1070 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PRLR	P16471	622 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	GRK6	P43250	576 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	CCNH	P51946	323 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TPM4	P67936	248 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	SCAP	Q12770	1279 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	STAT4	Q14765	748 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	SETMAR	Q53H47	684 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	PPP1R15B	Q5SWA1	713 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	DBX2	Q6ZNG2	339 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ERN2	Q76MJ5	926 aa	Known RBP	13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TMC6	Q7Z403	805 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	SLCO6A1	Q86UG4	719 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	TRIM69	Q86WT6	500 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	DNAAF5	Q86Y56	855 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	OR6K2	Q8NGY2	324 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	HEPH	Q9BQS7	1158 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	MAGEH1	Q9H213	219 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	HAUS4	Q9H6D7	363 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	ZDHHC6	Q9H6R6	413 aa		13.89	□□□□□ -0.19
CDK5RAP3-233	ENST00000584186	HECA	Q9UBI9	543 aa	Predicted RBP	13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms