RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 MAPK8IP1Q9UQF2 711 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 DMTF1Q9Y222 760 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 COQ4Q9Y3A0 265 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 PCDHB1Q9Y5F3 818 aa5.5□□□□□ -1.53
VAPA-207ENST00000583879 APC2O95996 2303 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 ITIH6Q6UXX5 1313 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 COL5A1P20908 1838 aaPredicted RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 GCN1Q92616 2671 aaKnown RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 HMGB1P1B2RPK0 211 aaPredicted RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 FAM229AH3BQW9 127 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 M0R082 166 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 O00370 1275 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 KLK10O43240 276 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SLC7A4O43246 635 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 TPD52L2O43399 206 aaKnown RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 PLRG1O43660 514 aaKnown RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 OPA1O60313 960 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SDC3O75056 442 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 RTN2O75298 545 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 USP12O75317 370 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 RHOBTB3O94955 611 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 LTFP02788 710 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 FYNP06241 537 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 GP1BAP07359 652 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 GIMD1P0DJR0 217 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SETSIPP0DME0 302 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CKMT1AP12532 417 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CD19P15391 556 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 DGKAP23743 735 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 MZF1P28698 734 aaPredicted RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 MAT2AP31153 395 aaKnown RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 RGS7P49802 495 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 DAB2P98082 770 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CUL2Q13617 745 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SLC12A1Q13621 1099 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CDH18Q13634 790 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 LY6DQ14210 128 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CNGA2Q16280 664 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 HS1BP3Q53T59 392 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 DCAF6Q58WW2 860 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SAMD5Q5TGI4 173 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 FAM46CQ5VWP2 391 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 ATL3Q6DD88 541 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 PMF1Q6P1K2 205 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 TRIM69Q86WT6 500 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 GUF1Q8N442 669 aaKnown RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 FAM181AQ8N9Y4 354 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 ZNF417Q8TAU3 575 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 FRS2Q8WU20 508 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 KCNE4Q8WWG9 221 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 TTC9Q92623 222 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CCDC47Q96A33 483 aaKnown RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 SLC39A13Q96H72 371 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 FCRL2Q96LA5 508 aaPredicted RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 HSFY1Q96LI6 401 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SERPINB11Q96P15 392 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 SPAG5Q96R06 1193 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 PPP1R9BQ96SB3 815 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 ZNF587Q96SQ5 575 aaPredicted RBP5.49□□□□□ -1.53
VAPA-207ENST00000583879 SEMA4CQ9C0C4 833 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 ABCG4Q9H172 646 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 OSBPL2Q9H1P3 480 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CLMPQ9H6B4 373 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 POLR1BQ9H9Y6 1135 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 UCKL1Q9NWZ5 548 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 USP25Q9UHP3 1055 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 NAALADL1Q9UQQ1 740 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 TLR6Q9Y2C9 796 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 CEP83Q9Y592 693 aa5.49□□□□□ -1.53
VAPA-207ENST00000583879 ACACAQ13085 2346 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 A0A1B0GVL5 298 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 A0A1B0GVM2 712 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 NEMP2A6NFY4 417 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 MCF2LO15068 1137 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 SCAMP1O15126 338 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 CETN3O15182 167 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 SLC31A1O15431 190 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 CSO75390 466 aaKnown RBP5.48□□□□□ -1.53
VAPA-207ENST00000583879 FBXO21O94952 628 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 WISP1O95388 367 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 PAEPP09466 180 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 THEGLP0DJG4 465 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 ZSCAN22P10073 491 aaPredicted RBP5.48□□□□□ -1.53
VAPA-207ENST00000583879 VAV1P15498 845 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 CMA1P23946 247 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 STK19P49842 368 aaPredicted RBP5.48□□□□□ -1.53
VAPA-207ENST00000583879 MXI1P50539 228 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 DUSP3P51452 185 aaPredicted RBP5.48□□□□□ -1.53
VAPA-207ENST00000583879 PLK1P53350 603 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 METAP1P53582 386 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 YWHAEP62258 255 aaKnown RBP5.48□□□□□ -1.53
VAPA-207ENST00000583879 GABREP78334 506 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 NUCB2P80303 420 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 SULT2A1Q06520 285 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 CNTN1Q12860 1018 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 EDRF1Q3B7T1 1238 aa5.48□□□□□ -1.53
VAPA-207ENST00000583879 POM121L1PQ3SYA9 428 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms