RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	HORMAD1	Q86X24	394 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	DRC7	Q8IY82	874 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SLC25A45	Q8N413	288 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	EMC1	Q8N766	993 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	DCAF4L2	Q8NA75	395 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	OR13H1	Q8NG92	308 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NT5C3B	Q969T7	300 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NXPE2	Q96DL1	559 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	BBC3	Q96PG8	261 aa	Predicted RBP	11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CLSTN2	Q9H4D0	955 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SCUBE2	Q9NQ36	999 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	METTL5	Q9NRN9	209 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SAMSN1	Q9NSI8	373 aa	Known RBP	11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	MYLK	Q15746	1914 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	BAHCC1	Q9P281	2608 aa		11.89	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TDRD6	O60522	2096 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TLX3	O43711	291 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	GJB6	O95452	261 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	F9	P00740	461 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PRNP	P04156	253 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	C1S	P09871	688 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	HNRNPA2B1	P22626	353 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	DGKA	P23743	735 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ITPKB	P27987	946 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	AKT2	P31751	481 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CDH5	P33151	784 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NUDT1	P36639	197 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	KLK7	P49862	253 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	DAB2	P98082	770 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	OVGP1	Q12889	678 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ACAP1	Q15027	740 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CDO1	Q16878	200 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ARTN	Q5T4W7	220 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	GCNT7	Q6ZNI0	430 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ERN2	Q76MJ5	926 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TMEM145	Q8NBT3	493 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TMIE	Q8NEW7	156 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	OR6K2	Q8NGY2	324 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SLC20A1	Q8WUM9	679 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PGAP3	Q96FM1	320 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TM6SF2	Q9BZW4	377 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ATP13A1	Q9HD20	1204 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TAB2	Q9NYJ8	693 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	FCF1	Q9Y324	198 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PAXBP1	Q9Y5B6	917 aa		11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SMG1	Q96Q15	3661 aa	Known RBP	11.88	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	BPTF	Q12830	3046 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	IGLV3-10	A0A075B6K4	115 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114		A0A087WV48	116 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114		F8VZ95	297 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ZNF821	O75541	412 aa	Predicted RBP	11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	GFPT2	O94808	682 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	UCHL3	P15374	230 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	GK	P32189	559 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ACVRL1	P37023	503 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ABCG1	P45844	678 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SERPINH1	P50454	418 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CLCN6	P51797	869 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NOMO3	P69849	1222 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ARF5	P84085	180 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	INSM1	Q01101	510 aa	Predicted RBP	11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	GNA12	Q03113	381 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	FGL2	Q14314	439 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PROX2	Q3B8N5	592 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	KDM7A	Q6ZMT4	941 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	LEKR1	Q6ZMV7	388 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SLC22A18AS	Q8N1D0	253 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	EPS8L1	Q8TE68	723 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	C1orf74	Q96LT6	269 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NAA15	Q9BXJ9	866 aa	Known RBP	11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	MAGEB5	Q9BZ81	275 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ZYG11B	Q9C0D3	744 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ZDHHC6	Q9H6R6	413 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NDFIP2	Q9NV92	336 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ZNF212	Q9UDV6	495 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TMEM59L	Q9UK28	342 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	WASF2	Q9Y6W5	498 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	KNTC1	P50748	2209 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	DOCK4	Q8N1I0	1966 aa		11.87	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ILVBL	A1L0T0	632 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	RAD51B	O15315	384 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ZMPSTE24	O75844	475 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PIAS2	O75928	621 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NEBL	O76041	1014 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	LSM8	O95777	96 aa	Known RBP	11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	PAK4	O96013	591 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CDK4	P11802	303 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ADRB3	P13945	408 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ACP1	P24666	158 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	SCNN1A	P37088	669 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CCNH	P51946	323 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	NEK3	P51956	506 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	CCDC15	Q0P6D6	951 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	ZNF211	Q13398	564 aa	Predicted RBP	11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	HS1BP3	Q53T59	392 aa		11.86	□□□□□ -0.51
CDK5RAP3-223	ENST00000582114	TCP11X2	Q5H9J9	407 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms