RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 AJAP1Q9UKB5 411 aaPredicted RBP10.85□□□□□ -0.67
RFFL-209ENST00000581265 STAP1Q9ULZ2 295 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 CLCA2Q9UQC9 943 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 CA5BQ9Y2D0 317 aa10.85□□□□□ -0.67
RFFL-209ENST00000581265 ILVBLA1L0T0 632 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 ERVH48-1M5A8F1 160 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 TLX3O43711 291 aaPredicted RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 SLC28A2O43868 658 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 SDC3O75056 442 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 ZNF821O75541 412 aaPredicted RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 RHOCP08134 193 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 GIMD1P0DJR0 217 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 PRLRP16471 622 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 HNRNPA2B1P22626 353 aaKnown RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 GLDCP23378 1020 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 DGKAP23743 735 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 RRM1P23921 792 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 AKT2P31751 481 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 MTIF2P46199 727 aaKnown RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 RNASE9P60153 205 aaKnown RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 INSM1Q01101 510 aaPredicted RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 CAMK4Q16566 473 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 ZNF783Q6ZMS7 281 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 ERN2Q76MJ5 926 aaKnown RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 ABI3BPQ7Z7G0 1075 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 MLKLQ8NB16 471 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 CHST14Q8NCH0 376 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 TMEM35BQ8NCS4 154 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 OR4C6Q8NH72 309 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 SNIP1Q8TAD8 396 aaKnown RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 FAM174AQ8TBP5 190 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 FGF11Q92914 225 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 ARRDC3Q96B67 414 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 C18orf8Q96DM3 657 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 IFT43Q96FT9 208 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 PLCB1Q9NQ66 1216 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 MPP6Q9NZW5 540 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 HS3ST3A1Q9Y663 406 aa10.84□□□□□ -0.67
RFFL-209ENST00000581265 NYNRINQ9P2P1 1898 aaKnown RBP10.84□□□□□ -0.67
RFFL-209ENST00000581265 LOC400499M0QZD8 3231 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 CXorf51AA0A1B0GTR3 108 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 B8ZZF3 427 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 RNF103O00237 685 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 ZMPSTE24O75844 475 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 PIAS2O75928 621 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 PCDH8O95206 1070 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
RFFL-209ENST00000581265 CKMT1AP12532 417 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
RFFL-209ENST00000581265 CYP11B1P15538 503 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 OR1E1P30953 314 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 RECQLP46063 649 aaPredicted RBP10.83□□□□□ -0.68
RFFL-209ENST00000581265 SULT1E1P49888 294 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 DEUP1Q05D60 604 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 CCDC173Q0VFZ6 552 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 MAN2A1Q16706 1144 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 TMEM259Q4ZIN3 620 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 HS1BP3Q53T59 392 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 ARSIQ5FYB1 569 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 RETSATQ6NUM9 610 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 LINGO4Q6UY18 593 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 DPY19L3Q6ZPD9 716 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 ARCQ7LC44 396 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 BNIPLQ7Z465 357 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 ERICH1Q86X53 443 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 DCP2Q8IU60 420 aaKnown RBP10.83□□□□□ -0.68
RFFL-209ENST00000581265 PIAS4Q8N2W9 510 aaPredicted RBP10.83□□□□□ -0.68
RFFL-209ENST00000581265 OR13H1Q8NG92 308 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 KLK6Q92876 244 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 TBCBQ99426 244 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 CEP44Q9C0F1 390 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 NDST4Q9H3R1 872 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 DYRK4Q9NR20 520 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 TMPRSS4Q9NRS4 437 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 UCKL1Q9NWZ5 548 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 IL36AQ9UHA7 158 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 TMEM59LQ9UK28 342 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 ZFR2Q9UPR6 939 aaKnown RBP10.83□□□□□ -0.68
RFFL-209ENST00000581265 SNX10Q9Y5X0 201 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 MYLKQ15746 1914 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 ZNF462Q96JM2 2506 aa10.83□□□□□ -0.68
RFFL-209ENST00000581265 NEMP2A6NFY4 417 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 BRINP1O60477 761 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 SRGAP2O75044 1071 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 LEFTY1O75610 366 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 ENDOD1O94919 500 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 MT-CO3P00414 261 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 NTRK1P04629 796 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 ACTN2P35609 894 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 FLT3P36888 993 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 CLDN2P57739 230 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 UBE2HP62256 183 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 DAB2P98082 770 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 RHDQ02161 417 aa10.82□□□□□ -0.68
RFFL-209ENST00000581265 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
RFFL-209ENST00000581265 TPD52L1Q16890 204 aaPredicted RBP10.82□□□□□ -0.68
RFFL-209ENST00000581265 VWA3BQ502W6 1294 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms