RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 CIR1Q86X95 450 aaPredicted RBP15.04■□□□□ -0
IFT20-211ENST00000580991 FBXO39Q8N4B4 442 aa15.04■□□□□ -0
IFT20-211ENST00000580991 TMIEQ8NEW7 156 aa15.04■□□□□ -0
IFT20-211ENST00000580991 LMX1AQ8TE12 382 aa15.04■□□□□ -0
IFT20-211ENST00000580991 FAM149B1Q96BN6 582 aa15.04■□□□□ -0
IFT20-211ENST00000580991 ALG14Q96F25 216 aa15.04■□□□□ -0
IFT20-211ENST00000580991 CCDC3Q9BQI4 270 aa15.04■□□□□ -0
IFT20-211ENST00000580991 FEM1AQ9BSK4 669 aa15.04■□□□□ -0
IFT20-211ENST00000580991 TRIM62Q9BVG3 475 aa15.04■□□□□ -0
IFT20-211ENST00000580991 SLC17A9Q9BYT1 436 aa15.04■□□□□ -0
IFT20-211ENST00000580991 MIS12Q9H081 205 aa15.04■□□□□ -0
IFT20-211ENST00000580991 SEPT10Q9P0V9 454 aa15.04■□□□□ -0
IFT20-211ENST00000580991 KLF15Q9UIH9 416 aa15.04■□□□□ -0
IFT20-211ENST00000580991 NBPF19A0A087WUL8 3843 aa15.04■□□□□ -0
IFT20-211ENST00000580991 KCNU1A8MYU2 1149 aa15.03■□□□□ -0
IFT20-211ENST00000580991 TMX2-CTNND1H3BSU7 103 aa15.03■□□□□ -0
IFT20-211ENST00000580991 M0QYV0 167 aa15.03■□□□□ -0
IFT20-211ENST00000580991 NTN3O00634 580 aaPredicted RBP15.03■□□□□ -0
IFT20-211ENST00000580991 PRNPP04156 253 aa15.03■□□□□ -0
IFT20-211ENST00000580991 MYL1P05976 194 aa15.03■□□□□ -0
IFT20-211ENST00000580991 PAEPP09466 180 aa15.03■□□□□ -0
IFT20-211ENST00000580991 CHRNA3P32297 505 aa15.03■□□□□ -0
IFT20-211ENST00000580991 UGT1A5P35504 534 aa15.03■□□□□ -0
IFT20-211ENST00000580991 RPS21P63220 83 aaKnown RBP15.03■□□□□ -0
IFT20-211ENST00000580991 SRSF6Q13247 344 aaKnown RBP15.03■□□□□ -0
IFT20-211ENST00000580991 STILQ15468 1287 aa15.03■□□□□ -0
IFT20-211ENST00000580991 CNGA2Q16280 664 aa15.03■□□□□ -0
IFT20-211ENST00000580991 MANEAQ5SRI9 462 aa15.03■□□□□ -0
IFT20-211ENST00000580991 SYPL2Q5VXT5 272 aa15.03■□□□□ -0
IFT20-211ENST00000580991 KIAA1161Q6NSJ0 714 aa15.03■□□□□ -0
IFT20-211ENST00000580991 ERN2Q76MJ5 926 aaKnown RBP15.03■□□□□ -0
IFT20-211ENST00000580991 BEND5Q7L4P6 421 aa15.03■□□□□ -0
IFT20-211ENST00000580991 SLC35F3Q8IY50 421 aa15.03■□□□□ -0
IFT20-211ENST00000580991 ATP6V0D2Q8N8Y2 350 aa15.03■□□□□ -0
IFT20-211ENST00000580991 BTN2A2Q8WVV5 523 aa15.03■□□□□ -0
IFT20-211ENST00000580991 TFAP2BQ92481 460 aa15.03■□□□□ -0
IFT20-211ENST00000580991 PRMT1Q99873 361 aaKnown RBP15.03■□□□□ -0
IFT20-211ENST00000580991 HDAC8Q9BY41 377 aa15.03■□□□□ -0
IFT20-211ENST00000580991 STRADBQ9C0K7 418 aa15.03■□□□□ -0
IFT20-211ENST00000580991 SYNDIG1Q9H7V2 258 aa15.03■□□□□ -0
IFT20-211ENST00000580991 EPB41L5Q9HCM4 733 aa15.03■□□□□ -0
IFT20-211ENST00000580991 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.03■□□□□ -0
IFT20-211ENST00000580991 GEMIN8Q9NWZ8 242 aaKnown RBP15.03■□□□□ -0
IFT20-211ENST00000580991 SPASTQ9UBP0 616 aa15.03■□□□□ -0
IFT20-211ENST00000580991 SLC12A6Q9UHW9 1150 aa15.03■□□□□ -0
IFT20-211ENST00000580991 VPS28Q9UK41 221 aa15.03■□□□□ -0
IFT20-211ENST00000580991 HS3ST2Q9Y278 367 aa15.03■□□□□ -0
IFT20-211ENST00000580991 PCDHGA4Q9Y5G9 962 aa15.03■□□□□ -0
IFT20-211ENST00000580991 CASC3O15234 703 aaKnown RBP15.02■□□□□ -0
IFT20-211ENST00000580991 NVLO15381 856 aaKnown RBP15.02■□□□□ -0
IFT20-211ENST00000580991 ACTN4O43707 911 aaKnown RBP15.02■□□□□ -0
IFT20-211ENST00000580991 PAK4O96013 591 aaPredicted RBP15.02■□□□□ -0
IFT20-211ENST00000580991 PRR29P0C7W0 189 aa15.02■□□□□ -0
IFT20-211ENST00000580991 TBXAS1P24557 533 aaPredicted RBP15.02■□□□□ -0
IFT20-211ENST00000580991 ME1P48163 572 aa15.02■□□□□ -0
IFT20-211ENST00000580991 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
IFT20-211ENST00000580991 PDE1CQ14123 709 aaPredicted RBP15.02■□□□□ -0
IFT20-211ENST00000580991 UBR7Q8N806 425 aa15.02■□□□□ -0
IFT20-211ENST00000580991 OR2A12Q8NGT7 310 aa15.02■□□□□ -0
IFT20-211ENST00000580991 PPP1R16AQ96I34 528 aa15.02■□□□□ -0
IFT20-211ENST00000580991 PCDHA7Q9UN72 937 aa15.02■□□□□ -0
IFT20-211ENST00000580991 MAPK8IP1Q9UQF2 711 aa15.02■□□□□ -0
IFT20-211ENST00000580991 ZDHHC9Q9Y397 364 aa15.02■□□□□ -0
IFT20-211ENST00000580991 COQ4Q9Y3A0 265 aa15.02■□□□□ -0
IFT20-211ENST00000580991 UNC13CQ8NB66 2214 aa15.02□□□□□ -0.01
IFT20-211ENST00000580991 CENPEQ02224 2701 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 RP1L1Q8IWN7 2480 aaPredicted RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 LMO7DNF2Z398 122 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 FPGTO14772 594 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 TRUB2O95900 331 aaKnown RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 JMJD7P0C870 316 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 SRCP12931 536 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 PKP1Q13835 747 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 CBWD6Q4V339 395 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 C4orf17Q53FE4 359 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 PRRT3Q5FWE3 981 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 CBWD3Q5JTY5 395 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 CBWD5Q5RIA9 395 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 ESRP1Q6NXG1 681 aaKnown RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 TMEM270Q6UE05 265 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 B3GNT8Q7Z7M8 397 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 GUF1Q8N442 669 aaKnown RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 ATP11CQ8NB49 1132 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 OR52K2Q8NGK3 314 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 FEM1CQ96JP0 617 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 RPRD1AQ96P16 312 aaPredicted RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 GFM1Q96RP9 751 aaKnown RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 APOBEC3BQ9UH17 382 aaKnown RBP15.01□□□□□ -0.01
IFT20-211ENST00000580991 PADI4Q9UM07 663 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 OR51B4Q9Y5P0 310 aa15.01□□□□□ -0.01
IFT20-211ENST00000580991 SCN8AQ9UQD0 1980 aa15□□□□□ -0.01
IFT20-211ENST00000580991 ICE1Q9Y2F5 2266 aa15□□□□□ -0.01
IFT20-211ENST00000580991 CLEC18AA5D8T8 446 aa15□□□□□ -0.01
IFT20-211ENST00000580991 RAD51BO15315 384 aa15□□□□□ -0.01
IFT20-211ENST00000580991 SPINT1O43278 529 aa15□□□□□ -0.01
IFT20-211ENST00000580991 GCATO75600 419 aa15□□□□□ -0.01
IFT20-211ENST00000580991 MT-CO1P00395 513 aa15□□□□□ -0.01
IFT20-211ENST00000580991 IGLV3-25P01717 112 aa15□□□□□ -0.01
IFT20-211ENST00000580991 ANXA6P08133 673 aa15□□□□□ -0.01
IFT20-211ENST00000580991 SLC2A3P11169 496 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms