RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 NEMP2A6NFY4 417 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 CAPN8A6NHC0 703 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 H3BM21 787 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 CBX4O00257 560 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 BNIP3LO60238 219 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 F9P00740 461 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 THEGLP0DJG4 465 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 VAV1P15498 845 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 HNRNPA2B1P22626 353 aaKnown RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 NOS2P35228 1153 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 KRT9P35527 623 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 DUSP3P51452 185 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 TPM4P67936 248 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 NME3Q13232 169 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 E4F1Q66K89 784 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 OR6B2Q6IFH4 312 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 SLC26A9Q7LBE3 791 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 SETD3Q86TU7 594 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 SPATS2Q86XZ4 545 aaKnown RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 DCP2Q8IU60 420 aaKnown RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 WDTC1Q8N5D0 677 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 DCAF4L2Q8NA75 395 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 ATP11CQ8NB49 1132 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 TMIEQ8NEW7 156 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 ZNF397Q8NF99 534 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 NEK11Q8NG66 645 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 PCMTD1Q96MG8 357 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-214ENST00000580073 CPXM1Q96SM3 734 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 DUSP23Q9BVJ7 150 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 NCKIPSDQ9NZQ3 722 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 ARHGAP20Q9P2F6 1191 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 TBC1D30Q9Y2I9 924 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 HS3ST4Q9Y661 456 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 CELSR3Q9NYQ7 3312 aa13.69□□□□□ -0.22
TRAF4-214ENST00000580073 TEX51A0A1B0GUA7 166 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 A6NNZ2 444 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 M0QYT0 321 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 KPNA3O00505 521 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-214ENST00000580073 ATXN7O15265 892 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-214ENST00000580073 GFPT2O94808 682 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 GP1BAP07359 652 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 CHRNB2P17787 502 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 UCNP55089 124 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 BPIFB4P59827 614 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 BNIP3Q12983 259 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 PROX2Q3B8N5 592 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 FILIP1LQ4L180 1135 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 BROXQ5VW32 411 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 RETSATQ6NUM9 610 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 OLFML1Q6UWY5 402 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 KANSL1Q7Z3B3 1105 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 NOP9Q86U38 636 aaKnown RBP13.68□□□□□ -0.22
TRAF4-214ENST00000580073 HORMAD1Q86X24 394 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 LSMEM2Q8N112 164 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 DCBLD1Q8N8Z6 715 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 TMEM145Q8NBT3 493 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 FGF11Q92914 225 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 FCRL3Q96P31 734 aaPredicted RBP13.68□□□□□ -0.22
TRAF4-214ENST00000580073 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 PDCL3Q9H2J4 239 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 KLHL11Q9NVR0 708 aa13.68□□□□□ -0.22
TRAF4-214ENST00000580073 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 A0A1W2PQU0 124 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 FAM170AA1A519 330 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 WNT9AO14904 365 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 BRINP1O60477 761 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SDC3O75056 442 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 PAGE1O75459 146 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SRCP12931 536 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 CYP11B1P15538 503 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 CHRNA3P32297 505 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SOX5P35711 763 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SCNN1AP37088 669 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 ETFBP38117 255 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 PCBP4P57723 403 aaKnown RBP13.67□□□□□ -0.22
TRAF4-214ENST00000580073 PITX1P78337 314 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-214ENST00000580073 TBC1D25Q3MII6 688 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 C22orf39Q6P5X5 142 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 ZNF783Q6ZMS7 281 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 PASD1Q8IV76 773 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SLC20A1Q8WUM9 679 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 ALG14Q96F25 216 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 PGAP3Q96FM1 320 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-214ENST00000580073 WDCPQ9H6R7 721 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAF4-214ENST00000580073 NLGN3Q9NZ94 848 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 IL36AQ9UHA7 158 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 VPS51Q9UID3 782 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 NOCTQ9UK39 431 aaKnown RBP13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SARDHQ9UL12 918 aa13.67□□□□□ -0.22
TRAF4-214ENST00000580073 SIGLEC6O43699 453 aa13.66□□□□□ -0.22
TRAF4-214ENST00000580073 TLX3O43711 291 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-214ENST00000580073 GRAP2O75791 330 aa13.66□□□□□ -0.22
TRAF4-214ENST00000580073 PCDH8O95206 1070 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms