RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 RUNDC3BQ96NL0 473 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 QKIQ96PU8 341 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 VAT1Q99536 393 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LMAN1LQ9HAT1 526 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FBRSL1Q9HCM7 1045 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SEPT3Q9UH03 358 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FEZ2Q9UHY8 353 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SIT1Q9Y3P8 196 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZDBF2Q9HCK1 2354 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 EDDM13A0A1B0GTR0 161 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PROB1E7EW31 1015 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCDC188H7C350 402 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SYNCRIPO60506 623 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SNAP91O60641 907 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MAFKO60675 156 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZMPSTE24O75844 475 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 IGSF6O95976 241 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SRCP12931 536 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TARSP26639 723 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NTSR1P30989 418 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MAPK8P45983 427 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RHOAP61586 193 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SNRPD1P62314 119 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ARF5P84085 180 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RAD51Q06609 339 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ADCY2Q08462 1091 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SLC10A2Q12908 348 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZNF234Q14588 700 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 WHAMMP3Q1A5X7 153 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 C2orf27AQ580R0 203 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 EGFLAMQ63HQ2 1017 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TMEM215Q68D42 235 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ERMP1Q7Z2K6 904 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PCDH20Q8N6Y1 951 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RPLP0P6Q8NHW5 317 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GRK7Q8WTQ7 553 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CYB5D2Q8WUJ1 264 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HTR3CQ8WXA8 447 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ISG20Q96AZ6 181 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RPL10LQ96L21 214 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LGMNQ99538 433 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FBRSQ9HAH7 460 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SEPT10Q9P0V9 454 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SAE1Q9UBE0 346 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CDC23Q9UJX2 597 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZNF148Q9UQR1 794 aa11.48□□□□□ -0.57
CDK5RAP3-210ENST00000578733 BCLAF3A2AJT9 711 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CHURC1-FNTBB4DL54 471 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 J3KR12 359 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZNF185O15231 689 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ATP9BO43861 1147 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RNASEH1O60930 286 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TMCC1O94876 653 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KLF8O95600 359 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GSRP00390 522 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 EPHX1P07099 455 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CHRNB1P11230 501 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCNB1P14635 433 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CES1P23141 567 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GLDCP23378 1020 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 AVPR2P30518 371 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 STIP1P31948 543 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CTSOP43234 321 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KIR2DL1P43626 348 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MMP13P45452 471 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RPS9P46781 194 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NUMBP49757 651 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 STK19P49842 368 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 IFI35P80217 286 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ITKQ08881 620 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PRKD1Q15139 912 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 DLG2Q15700 870 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PTPRNQ16849 979 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RALGPS1Q5JS13 557 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ITPRIPL1Q6GPH6 555 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 C22orf39Q6P5X5 142 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 DRICH1Q6PGQ1 229 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ARHGAP36Q6ZRI8 547 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GSTA5Q7RTV2 222 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 DSG4Q86SJ6 1040 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCDC33Q8N5R6 958 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NETO2Q8NC67 525 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MNS1Q8NEH6 495 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SLC35B2Q8TB61 432 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MAML1Q92585 1016 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NKD2Q969F2 451 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LRRC45Q96CN5 670 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MS4A14Q96JA4 679 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GDAP1L1Q96MZ0 367 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PPP1R2P1Q96PQ5 205 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HERPUD2Q9BSE4 406 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FOXQ1Q9C009 403 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 POLR1EQ9GZS1 481 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PDFQ9HBH1 243 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms