RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 HS6ST1O60243 411 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 FESP07332 822 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 HLA-DPA1P20036 260 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 POU1F1P28069 291 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 PGGT1BP53609 377 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 FBXO39Q8N4B4 442 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 RP9Q8TA86 221 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 ACMSDQ8TDX5 336 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 C7orf43Q8WVR3 580 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SLCO2A1Q92959 643 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SMAD5Q99717 465 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 POPDC2Q9HBU9 364 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 LRRC42Q9Y546 428 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SNX10Q9Y5X0 201 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 KANSL1LA0AUZ9 987 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 A8MX80 341 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 NOS2P35228 1153 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 TAF2Q6P1X5 1199 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 MOB2Q70IA6 237 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 HORMAD1Q86X24 394 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 ERO1BQ86YB8 467 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 HS6ST3Q8IZP7 471 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 PTGR2Q8N8N7 351 aaPredicted RBP18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SPATA22Q8NHS9 363 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 METTL6Q8TCB7 284 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 LPGAT1Q92604 370 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 PLEKHG4BQ96PX9 1271 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 HBEGFQ99075 208 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 IL22Q9GZX6 179 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 CKMT2P17540 419 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 MAGP20916 626 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 AKT1P31749 480 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 RAD51Q06609 339 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 FRG1Q14331 258 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 GRM3Q14832 879 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 LSM12Q3MHD2 195 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 FSTL4Q6MZW2 842 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC27A1Q6PCB7 646 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 MRIQ9BWK5 157 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 TRIM54Q9BYV2 358 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 SDCBP2Q9H190 292 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 TMEM161AQ9NX61 479 aa18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 TDRKHQ9Y2W6 561 aaKnown RBP18.12■□□□□ 0.49
ATPAF1-214ENST00000576409 ZBTB24O43167 697 aaPredicted RBP18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 OR6B1O95007 311 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 THP07101 528 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 HGFP14210 728 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 FMO4P31512 558 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 C1orf220Q5T0J3 134 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 CLEC6AQ6EIG7 209 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 LRRC8DQ7L1W4 858 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 MIPEPQ99797 713 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 TBL1YQ9BQ87 522 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 LIN28AQ9H9Z2 209 aaKnown RBP18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 LGALS2P05162 132 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 LIPMQ5VYY2 423 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 HERC6Q8IVU3 1022 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 ATG16L2Q8NAA4 619 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 C6orf203Q9P0P8 240 aaPredicted RBP18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 RSL24D1Q9UHA3 163 aaKnown RBP18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 TRIM38O00635 465 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 NCAM2O15394 837 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 CILPO75339 1184 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 IVDP26440 423 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 PSEN1P49768 467 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 CCR3P51677 355 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 RPS6KA3P51812 740 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 CAMK1DQ8IU85 385 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 OFCC1Q8IZS5 231 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 DHX33Q9H6R0 707 aaKnown RBP18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 ATXN10Q9UBB4 475 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 TUBGCP4Q9UGJ1 667 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 EFR3BQ9Y2G0 817 aa18.11■□□□□ 0.49
ATPAF1-214ENST00000576409 EVPLLA8MZ36 301 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 HACD1B0YJ81 288 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 BTN3A1O00481 513 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 HIST1H2AGP0C0S8 130 aaPredicted RBP18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 TSHRP16473 764 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 HIST1H2ADP20671 130 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 ATP6V1E1P36543 226 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC9B1Q4ZJI4 515 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 RHBDF2Q6PJF5 856 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 FRMD7Q6ZUT3 714 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 HIST1H2AHQ96KK5 128 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 HIST1H2AJQ99878 128 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 H2AFJQ9BTM1 129 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 ABCG8Q9H221 673 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 SPAG4Q9NPE6 437 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 VPS45Q9NRW7 570 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 TELO2Q9Y4R8 837 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 SLC12A8A0AV02 714 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 ABLIM1O14639 778 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 LINC00032P0C843 101 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 PTPN1P18031 435 aaKnown RBP18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 MPP1Q00013 466 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 ANKS6Q68DC2 871 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 BPIFB6Q8NFQ5 453 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 OR52B2Q96RD2 323 aa18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 NTPCRQ9BSD7 190 aaKnown RBP18.1■□□□□ 0.49
ATPAF1-214ENST00000576409 NXF3Q9H4D5 531 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms