RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TEAD4Q15561 434 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PIP5KL1Q5T9C9 394 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 DBX2Q6ZNG2 339 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 MCOLN2Q8IZK6 566 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 OR6K2Q8NGY2 324 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 RHBDD1Q8TEB9 315 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 VOPP1Q96AW1 172 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 BPIFA3Q9BQP9 254 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 TRIM7Q9C029 511 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 KLC2Q9H0B6 622 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 NOL6Q9H6R4 1146 aaKnown RBP12.15□□□□□ -0.46
LITAF-219ENST00000576334 OSGEPQ9NPF4 335 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 FZD3Q9NPG1 666 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 GPATCH2LQ9NWQ4 482 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 TOR4AQ9NXH8 423 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PPARGC1AQ9UBK2 798 aaKnown RBP12.15□□□□□ -0.46
LITAF-219ENST00000576334 PCDHB9Q9Y5E1 797 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 PLXNB3Q9ULL4 1909 aa12.15□□□□□ -0.46
LITAF-219ENST00000576334 SYCE3A1L190 88 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 C1QTNF3-AMACRE9PGA6 284 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 LATO43561 262 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 LEFTY1O75610 366 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 CALB1P05937 261 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 ZNF883P0CG24 379 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 SKILP12757 684 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 FERP16591 822 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 CD38P28907 300 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 CCR5P51681 352 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 GSCP56915 257 aaPredicted RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 C21orf59P57076 290 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 BNIP3Q12983 259 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 ZNF423Q2M1K9 1284 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 CCDC157Q569K6 752 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 FAM46CQ5VWP2 391 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 ACAD10Q6JQN1 1059 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 DNAJC24Q6P3W2 148 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 IL27RAQ6UWB1 636 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 UNQ6494/PRO21346Q6UXR6 183 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 STRADAQ7RTN6 431 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 ZNF571Q7Z3V5 609 aaPredicted RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 DSG4Q86SJ6 1040 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 SPATS2Q86XZ4 545 aaKnown RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 BAHD1Q8TBE0 780 aaPredicted RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 GATA6Q92908 595 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 ACE2Q9BYF1 805 aaPredicted RBP12.14□□□□□ -0.47
LITAF-219ENST00000576334 OSBPL2Q9H1P3 480 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 HAUS4Q9H6D7 363 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 DAAM1Q9Y4D1 1078 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 WASF2Q9Y6W5 498 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 PTPRBP23467 1997 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 CELSR3Q9NYQ7 3312 aa12.14□□□□□ -0.47
LITAF-219ENST00000576334 LAMA5O15230 3695 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ALOX15BO15296 676 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 SLC31A1O15431 190 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 CREB3O43889 395 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 RHOQP17081 205 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ZNF143P52747 638 aaPredicted RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 NRG1Q02297 640 aaPredicted RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 SFSWAPQ12872 951 aaKnown RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 CA9Q16790 459 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ARL13BQ3SXY8 428 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ATXN7L2Q5T6C5 722 aaPredicted RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 SEL1L3Q68CR1 1132 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 KDM7AQ6ZMT4 941 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 RAB44Q7Z6P3 723 aaPredicted RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 SLFN11Q7Z7L1 901 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 LUZP1Q86V48 1076 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ARFGAP1Q8N6T3 406 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ARHGEF2Q92974 986 aaKnown RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 TBC1D31Q96DN5 1066 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 NAT10Q9H0A0 1025 aaKnown RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 TMEM248Q9NWD8 314 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 GGT7Q9UJ14 662 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 FZD10Q9ULW2 581 aa12.13□□□□□ -0.47
LITAF-219ENST00000576334 ZFR2Q9UPR6 939 aaKnown RBP12.13□□□□□ -0.47
LITAF-219ENST00000576334 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 TLR4O00206 839 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 DDX3XO00571 662 aaKnown RBP eCLIP12.12□□□□□ -0.472e-10■■■■□ 25.4
LITAF-219ENST00000576334 PROS1P07225 676 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 CCT8P50990 548 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 CCNHP51946 323 aaPredicted RBP12.12□□□□□ -0.47
LITAF-219ENST00000576334 CLDN6P56747 220 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 CLDN2P57739 230 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 NXPH1P58417 271 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 MAMLD1Q13495 774 aa12.12□□□□□ -0.47
LITAF-219ENST00000576334 NR1I3Q14994 352 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms