RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HPCAL4Q9UM19 191 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 SCML1Q9UN30 329 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 FCF1Q9Y324 198 aaKnown RBP13.54□□□□□ -0.24
RPAIN-216ENST00000575599 ACTL7AQ9Y615 435 aa13.54□□□□□ -0.24
RPAIN-216ENST00000575599 FAM47DPA6NHR8 397 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 PRR5-ARHGAP8B1AHC4 643 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 EIF3CLB5ME19 914 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 MYO1FO00160 1098 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 KHNYNO15037 678 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 DAPK3O43293 454 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 NDUFA10O95299 355 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 SEMA4FO95754 770 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 CFIP05156 583 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 H2AFZP0C0S5 128 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 GOT1P17174 413 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 C5AR1P21730 350 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 MAOBP27338 520 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 IL1R2P27930 398 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 HTR7P34969 479 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 DPP6P42658 865 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 SSR1P43307 286 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 RECQLP46063 649 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 DNA2P51530 1060 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 METAP1P53582 386 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 ARHGAP8P85298 464 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 SFSWAPQ12872 951 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 ACAP1Q15027 740 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 RSPO4Q2I0M5 234 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 WDR45BQ5MNZ6 344 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 USP30Q70CQ3 517 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 H2AFVQ71UI9 128 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 HDDC3Q8N4P3 179 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 AADATQ8N5Z0 425 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 RMDN1Q96DB5 314 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 HMCESQ96FZ2 354 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 EIF3CQ99613 913 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 MIR1-1HGQ9H1L0 117 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 C6orf106Q9H6K1 298 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 NOL6Q9H6R4 1146 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 CDV3Q9UKY7 258 aaKnown RBP13.53□□□□□ -0.24
RPAIN-216ENST00000575599 SARDHQ9UL12 918 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
RPAIN-216ENST00000575599 CHD5Q8TDI0 1954 aa13.52□□□□□ -0.24
RPAIN-216ENST00000575599 LNP1A1A4G5 178 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 WASH4PA8MWX3 477 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 RASA4BC9J798 803 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 C1QTNF3-AMACRE9PGA6 284 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 PLK4O00444 970 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 MCF2LO15068 1137 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 ZSCAN12O43309 604 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 RASA4O43374 803 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 CCDC175P0C221 793 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 GJC1P36383 396 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 ID4P47928 161 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 FAM46CQ5VWP2 391 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 PEAR1Q5VY43 1037 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-216ENST00000575599 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 RFX8Q6ZV50 586 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 PSTKQ8IV42 348 aaKnown RBP13.52□□□□□ -0.25
RPAIN-216ENST00000575599 NIPA2Q8N8Q9 360 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 CHST14Q8NCH0 376 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 CADM4Q8NFZ8 388 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 OR2A12Q8NGT7 310 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 PIP4K2CQ8TBX8 421 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 GRIN3AQ8TCU5 1115 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 NETO1Q8TDF5 533 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 CELF6Q96J87 481 aaKnown RBP13.52□□□□□ -0.25
RPAIN-216ENST00000575599 EDEM2Q9BV94 578 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 TM6SF2Q9BZW4 377 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.52□□□□□ -0.25
RPAIN-216ENST00000575599 UVRAGQ9P2Y5 699 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
RPAIN-216ENST00000575599 TMEM110-MUSTN1A8MSY1 372 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 METTL12A8MUP2 240 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 ALOX15BO15296 676 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 BUB1O43683 1085 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 KDELR3O43731 214 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 FSBPO95073 299 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 CTSLP07711 333 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 TMEM253P0C7T8 217 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 RARAP10276 462 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 CHRNA3P32297 505 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 HOXD12P35452 270 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 GEMIN4P57678 1058 aaKnown RBP13.51□□□□□ -0.25
RPAIN-216ENST00000575599 IRX4P78413 519 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 SLC25A11Q02978 314 aaKnown RBP13.51□□□□□ -0.25
RPAIN-216ENST00000575599 SLC20A2Q08357 652 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 DUOXA1Q1HG43 343 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 PARP15Q460N3 678 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 TXNRD3NBQ6F5E7 133 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-216ENST00000575599 CPNE8Q86YQ8 564 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 UMODL1-AS1Q8N2C9 162 aa13.51□□□□□ -0.25
RPAIN-216ENST00000575599 RYBPQ8N488 228 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms