RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SH3TC2Q8TF17 1288 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 GIPC2Q8TF65 315 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 INPP5DQ92835 1189 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 MIPEPQ99797 713 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 THAP1Q9NVV9 213 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 KCNK4Q9NYG8 393 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 COPG2Q9UBF2 871 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 PHF24Q9UPV7 400 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 ALDH2P05091 517 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 GABRB3P28472 473 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 DUSP4Q13115 394 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 C10orf120Q5SQS8 335 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 PKN3Q6P5Z2 889 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 LONP2Q86WA8 852 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 SPNS2Q8IVW8 549 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 DENND6AQ8IWF6 608 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 AGAP11Q8TF27 550 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 PTCD3Q96EY7 689 aaKnown RBP24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 SCLYQ96I15 445 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 SAR1AQ9NR31 198 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 SLC39A10Q9ULF5 831 aa24.03■■□□□ 1.44
NPLOC4-217ENST00000574897 PSMD3O43242 534 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 VAPBO95292 243 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 SLC1A6P48664 564 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 IHHQ14623 411 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 SPDYAQ5MJ70 313 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 CCSER2Q9H7U1 834 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 NT5MQ9NPB1 228 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 DNAJC16Q9Y2G8 782 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 L3MBTL1Q9Y468 752 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 FAM92AA1XBS5 289 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 NEBLO76041 1014 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 C2P06681 752 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 ARNTP27540 789 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 CDK7P50613 346 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 MPP1Q00013 466 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 SLC10A7Q0GE19 358 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 CTBP1Q13363 440 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 PCID2Q5JVF3 399 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 TIGD7Q6NT04 549 aaPredicted RBP24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 FBXL22Q6P050 247 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 CCDC91Q7Z6B0 441 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 SLC25A41Q8N5S1 370 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 FSD1LQ9BXM9 530 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 ZYG11BQ9C0D3 744 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 MARCH2Q9P0N8 246 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 LRFN2Q9ULH4 789 aa24.02■■□□□ 1.44
NPLOC4-217ENST00000574897 SLC12A8A0AV02 714 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 OR6C75A6NL08 312 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 WASH4PA8MWX3 477 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 GEMP55040 296 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ITGA9Q13797 1035 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 INSCQ1MX18 579 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 PABPC5Q96DU9 382 aaKnown RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 OXCT2Q9BYC2 517 aaPredicted RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 PPARGC1AQ9UBK2 798 aaKnown RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 MKI67P46013 3256 aaKnown RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 PHGDHO43175 533 aaKnown RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ADAM12O43184 909 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 PTPN4P29074 926 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 AVPR1AP37288 418 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ICE2Q659A1 982 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ZC3HC1Q86WB0 502 aaKnown RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ZNF354CQ86Y25 554 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 TREML1Q86YW5 311 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 UMODL1-AS1Q8N2C9 162 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ARHGAP18Q8N392 663 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 PSMG2Q969U7 264 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 MOCOSQ96EN8 888 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 RAB3IPQ96QF0 476 aaPredicted RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 SORT1Q99523 831 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ELAC1Q9H777 363 aaKnown RBP24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 ACSS2Q9NR19 701 aa24.01■■□□□ 1.43
NPLOC4-217ENST00000574897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24■■□□□ 1.43
NPLOC4-217ENST00000574897 TBKBP1A7MCY6 615 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 AHSGP02765 367 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 SEPT6Q14141 434 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CNGA3Q16281 694 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 PDPK2PQ6A1A2 396 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CLEC14AQ86T13 490 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 PNPLA1Q8N8W4 532 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 LNPEPQ9UIQ6 1025 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 TRAFD1O14545 582 aaPredicted RBP24■■□□□ 1.43
NPLOC4-217ENST00000574897 GALTP07902 379 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 SLC2A3P11169 496 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CPA3P15088 417 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 RHOQP17081 205 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CPA2P48052 419 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CSE1LP55060 971 aaKnown RBP24■■□□□ 1.43
NPLOC4-217ENST00000574897 WNT3AP56704 352 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 ITKQ08881 620 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 GPR17Q13304 367 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 TRIP4Q15650 581 aaPredicted RBP24■■□□□ 1.43
NPLOC4-217ENST00000574897 RANBP10Q6VN20 620 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 FAM13CQ8NE31 585 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 NSL1Q96IY1 281 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 CFHR5Q9BXR6 569 aa24■■□□□ 1.43
NPLOC4-217ENST00000574897 PNPOQ9NVS9 261 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms