RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 LRRC43Q8N309 656 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 PPHLN1Q8NEY8 458 aaKnown RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 BCL7CQ8WUZ0 217 aaPredicted RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 PABPC5Q96DU9 382 aaKnown RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 RPRD1AQ96P16 312 aaPredicted RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 ATXN3LQ9H3M9 355 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 HIPK3Q9H422 1215 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 CCSER2Q9H7U1 834 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 ZNF395Q9H8N7 513 aaPredicted RBP14.27□□□□□ -0.12
VPS33B-208ENST00000574755 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.12
VPS33B-208ENST00000574755 IGLV3-10A0A075B6K4 115 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 C2orf71A6NGG8 1288 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 J3KR12 359 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 MGRN1O60291 552 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 TLR5O60602 858 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 UPP2O95045 317 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 CBX6O95503 412 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 GSRP00390 522 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 SERPINB3P29508 390 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 GMPRP36959 345 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 CSE1LP55060 971 aaKnown RBP14.27□□□□□ -0.13
VPS33B-208ENST00000574755 ZBTB16Q05516 673 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 HNRNPDQ14103 355 aaKnown RBP14.27□□□□□ -0.13
VPS33B-208ENST00000574755 PCSK7Q16549 785 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 DBN1Q16643 649 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 DENND5AQ6IQ26 1287 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 DEFB128Q7Z7B8 93 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 CRLF3Q8IUI8 442 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 C2orf15Q8WU43 125 aaKnown RBP14.27□□□□□ -0.13
VPS33B-208ENST00000574755 IGSF8Q969P0 613 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 ISL2Q96A47 359 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 TMEM237Q96Q45 408 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 PPP1R12CQ9BZL4 782 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 C20orf27Q9GZN8 174 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 CAB39LQ9H9S4 337 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 SP110Q9HB58 689 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 TMEM216Q9P0N5 145 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 NUMBLQ9Y6R0 609 aa14.27□□□□□ -0.13
VPS33B-208ENST00000574755 KRT16P08779 473 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 KITP10721 976 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 KCNA4P22459 653 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 ADRA1AP35348 466 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 ALDH7A1P49419 539 aaKnown RBP14.26□□□□□ -0.13
VPS33B-208ENST00000574755 ITKQ08881 620 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 MARC1Q5VT66 337 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 POTEHQ6S545 545 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 VPS39Q96JC1 886 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 MRGPRX2Q96LB1 330 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 NT5MQ9NPB1 228 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 NSMCE4AQ9NXX6 385 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-208ENST00000574755 STK38LQ9Y2H1 464 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 A0A096LPK6 155 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 SNNO75324 88 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-208ENST00000574755 PEX11BO96011 259 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 IGLV3-27P01718 113 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 PROCP04070 461 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 ATF6P18850 670 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 MAGEA12P43365 314 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 MAXP61244 160 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 PCLAFQ15004 111 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 SNCBQ16143 134 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 CIR1Q86X95 450 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-208ENST00000574755 PSMG2Q969U7 264 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 KLHL5Q96PQ7 755 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 OXCT2Q9BYC2 517 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-208ENST00000574755 FBXO6Q9NRD1 293 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-208ENST00000574755 THAP1Q9NVV9 213 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 ZNF358Q9NW07 568 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 COMMD8Q9NX08 183 aa14.26□□□□□ -0.13
VPS33B-208ENST00000574755 SLC38A8A6NNN8 435 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 HAUS5O94927 633 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 VAPBO95292 243 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 T-ENOLP0DO92 83 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 CHRNA4P43681 627 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 RASSF2P50749 326 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 RING1Q06587 406 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 SLC10A7Q0GE19 358 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 DLG2Q15700 870 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 MBLAC2Q68D91 279 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 RANBP10Q6VN20 620 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 CCDC117Q8IWD4 279 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-208ENST00000574755 NSMCE1Q8WV22 266 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 SKA1Q96BD8 255 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 SLC25A51Q9H1U9 297 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-208ENST00000574755 KCNK4Q9NYG8 393 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 COPG2Q9UBF2 871 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 TCAF1Q9Y4C2 921 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 ADAM12O43184 909 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 RAMP2O60895 175 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 MPOP05164 745 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 FGF3P11487 239 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-208ENST00000574755 RPL17P18621 184 aaKnown RBP14.25□□□□□ -0.13
VPS33B-208ENST00000574755 OR1E1P30953 314 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 WNT3AP56704 352 aa14.25□□□□□ -0.13
VPS33B-208ENST00000574755 SEPT6Q14141 434 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms