RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PSMB4P28070 264 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 HLTFQ14527 1009 aaKnown RBP eCLIP24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 BRD3Q15059 726 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 TEX26Q8N6G2 289 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 KCNK12Q9HB15 430 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 ETNK1Q9HBU6 452 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 WHRNQ9P202 907 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 NFU1Q9UMS0 254 aa24.48■■□□□ 1.51
ATPAF1-213ENST00000574428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 CCDC151A5D8V7 595 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 TP73O15350 636 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 CD160O95971 181 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 MYBL2P10244 700 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 GJA4P35212 333 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 CTSOP43234 321 aaPredicted RBP24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ITGA8P53708 1063 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 MESP2Q0VG99 397 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 CALCOCO2Q13137 446 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 CUL1Q13616 776 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 GEN1Q17RS7 908 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 NAIF1Q69YI7 327 aaPredicted RBP24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 C4orf22Q6V702 233 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 PLCD3Q8N3E9 789 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 GBA3Q9H227 469 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 NEUROG2Q9H2A3 272 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 TPX2Q9ULW0 747 aaKnown RBP24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 IL9P15248 144 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ECHS1P30084 290 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 PLTPP55058 493 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ZNF235Q14590 738 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ITPRIPL2Q3MIP1 535 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 RNASEH2BQ5TBB1 312 aaKnown RBP24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ITPRIPL1Q6GPH6 555 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ZDHHC24Q6UX98 284 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ADIPOR2Q86V24 386 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 PGBD5Q8N414 524 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 CPT1BQ92523 772 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ACDQ96AP0 544 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 ANAPC5Q9UJX4 755 aa24.47■■□□□ 1.51
ATPAF1-213ENST00000574428 MT-CO1P00395 513 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 ITIH2P19823 946 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 TNFRSF8P28908 595 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 MAXP61244 160 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 KDSRQ06136 332 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 PARP6Q2NL67 630 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 ANKRD22Q5VYY1 191 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 TMEM215Q68D42 235 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 CCNI2Q6ZMN8 369 aaPredicted RBP24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 KIAA0907Q7Z7F0 614 aaPredicted RBP24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 AHI1Q8N157 1196 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 GORASP1Q9BQQ3 440 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 GLOD4Q9HC38 313 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 IGSF9Q9P2J2 1179 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 DEC1Q9P2X7 70 aa24.46■■□□□ 1.51
ATPAF1-213ENST00000574428 K7ERQ8 282 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 MUSKO15146 869 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 ASGR2P07307 311 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 TUBBP07437 444 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 DMC1Q14565 340 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 GRAMD4Q6IC98 578 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 RETSATQ6NUM9 610 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 TSEN2Q8NCE0 465 aaKnown RBP24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 FBXO25Q8TCJ0 367 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 ART4Q93070 314 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 CHFRQ96EP1 664 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 CINPQ9BW66 212 aaPredicted RBP24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 ZDHHC18Q9NUE0 388 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 ATP8A1Q9Y2Q0 1164 aa24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 FARP1Q9Y4F1 1045 aaPredicted RBP24.45■■□□□ 1.5
ATPAF1-213ENST00000574428 KIAA1549LQ6ZVL6 1849 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 TCRBV7S3A2A0A539 114 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 TMCC1O94876 653 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 MCM3P25205 808 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 FDFT1P37268 417 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 OPRD1P41143 372 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 SOX9P48436 509 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 STK19P49842 368 aaPredicted RBP24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 ITKQ08881 620 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 RFTN1Q14699 578 aaPredicted RBP24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 CYTH1Q15438 398 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 MBLAC2Q68D91 279 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 HIBCHQ6NVY1 386 aaPredicted RBP24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 PPIL6Q8IXY8 311 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 SLC44A3Q8N4M1 653 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 BBOF1Q8ND07 529 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 RPL10LQ96L21 214 aaKnown RBP24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 SEPT3Q9UH03 358 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 SLC27A6Q9Y2P4 619 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 TICRRQ7Z2Z1 1910 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 APRTP07741 180 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 SEMA5AQ13591 1074 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 PUS10Q3MIT2 529 aaKnown RBP24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 CSGALNACT1Q8TDX6 532 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 FAM50BQ9Y247 325 aa24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 FCF1Q9Y324 198 aaKnown RBP24.44■■□□□ 1.5
ATPAF1-213ENST00000574428 TTC24A2A3L6 582 aaPredicted RBP24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 E7EVH7 732 aa24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 SMAD6O43541 496 aaKnown RBP24.43■■□□□ 1.5
ATPAF1-213ENST00000574428 GJB3O75712 270 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms