RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 OR14C36Q8NHC7 312 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 GANCQ8TET4 914 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
SMG6-212ENST00000573153 SELENOOQ9BVL4 669 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 SCNM1Q9BWG6 230 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 TNKS2Q9H2K2 1166 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 KDM4CQ9H3R0 1056 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 KLK13Q9UKR3 277 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 CABIN1Q9Y6J0 2220 aa17.69■□□□□ 0.42
SMG6-212ENST00000573153 C1QTNF9BB2RNN3 333 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 DDX3XO00571 662 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMG6-212ENST00000573153 PLEKP08567 350 aaPredicted RBP17.68■□□□□ 0.42
SMG6-212ENST00000573153 C1QTNF9P0C862 333 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 CHRNA3P32297 505 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 ACCSLQ4AC99 568 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 DNAJC24Q6P3W2 148 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 ZNF571Q7Z3V5 609 aaPredicted RBP17.68■□□□□ 0.42
SMG6-212ENST00000573153 SLCO6A1Q86UG4 719 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 ATP11CQ8NB49 1132 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 TMIEQ8NEW7 156 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 MCEEQ96PE7 176 aa17.68■□□□□ 0.42
SMG6-212ENST00000573153 SEPT11Q9NVA2 429 aaKnown RBP17.68■□□□□ 0.42
SMG6-212ENST00000573153 A0A1B0GTQ1 180 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 A0A1W2PQJ5 194 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 SPINT1O43278 529 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 PCDHGA12O60330 932 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 SERPINC1P01008 464 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 GZMAP12544 262 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 MAPKAPK2P49137 400 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 TPM4P67936 248 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 MAMLD1Q13495 774 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 TRIP6Q15654 476 aaKnown RBP17.67■□□□□ 0.42
SMG6-212ENST00000573153 SKOR2Q2VWA4 1001 aaPredicted RBP17.67■□□□□ 0.42
SMG6-212ENST00000573153 SFMBT2Q5VUG0 894 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 PLEKHA7Q6IQ23 1121 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 KANSL1Q7Z3B3 1105 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 LUZP1Q86V48 1076 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 SPATS2Q86XZ4 545 aaKnown RBP17.67■□□□□ 0.42
SMG6-212ENST00000573153 TMEM145Q8NBT3 493 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 TRIM7Q9C029 511 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 CEP44Q9C0F1 390 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 KLC2Q9H0B6 622 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 ATP13A1Q9HD20 1204 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 FZD10Q9ULW2 581 aa17.67■□□□□ 0.42
SMG6-212ENST00000573153 ZFR2Q9UPR6 939 aaKnown RBP17.67■□□□□ 0.42
SMG6-212ENST00000573153 FCF1Q9Y324 198 aaKnown RBP17.67■□□□□ 0.42
SMG6-212ENST00000573153 COL5A1P20908 1838 aaPredicted RBP17.67■□□□□ 0.42
SMG6-212ENST00000573153 C1QTNF3-AMACRE9PGA6 284 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 CBX4O00257 560 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 ATMINO43313 823 aaPredicted RBP17.66■□□□□ 0.42
SMG6-212ENST00000573153 BNIP3LO60238 219 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 CAPNS1P04632 268 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 FTH1P19P0C7X4 201 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 TNFAIP3P21580 790 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 L1CAMP32004 1257 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 AIF1P55008 147 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 NXPH1P58417 271 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 FANCCQ00597 558 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 HNRNPDQ14103 355 aaKnown RBP17.66■□□□□ 0.42
SMG6-212ENST00000573153 TEAD4Q15561 434 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 ASIC2Q16515 512 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 ZSCAN23Q3MJ62 389 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 PRAMEF14Q5SWL7 426 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 FAM46CQ5VWP2 391 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 HGSNATQ68CP4 663 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 NAPEPLDQ6IQ20 393 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 DSG4Q86SJ6 1040 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 TBC1D31Q96DN5 1066 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 IQCDQ96DY2 449 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 PEBP4Q96S96 227 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 CNPY3Q9BT09 278 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 HAUS4Q9H6D7 363 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 CAAP1Q9H8G2 361 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 TPX2Q9ULW0 747 aaKnown RBP17.66■□□□□ 0.42
SMG6-212ENST00000573153 PLXNB3Q9ULL4 1909 aa17.66■□□□□ 0.42
SMG6-212ENST00000573153 ANKRD62A6NC57 917 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 WASH4PA8MWX3 477 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 FLRT2O43155 660 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 LEFTY1O75610 366 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 CD38P28907 300 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 IL9RQ01113 521 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 SLC20A2Q08357 652 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 FGL2Q14314 439 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 TMEM259Q4ZIN3 620 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 ARSIQ5FYB1 569 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 SLFN11Q7Z7L1 901 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 CHCHD4Q8N4Q1 142 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 PCDH20Q8N6Y1 951 aaKnown RBP17.65■□□□□ 0.42
SMG6-212ENST00000573153 RTL3Q8N8U3 475 aaKnown RBP17.65■□□□□ 0.42
SMG6-212ENST00000573153 PNPLA1Q8N8W4 532 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 ADAMTS14Q8WXS8 1223 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 SYN2Q92777 582 aaPredicted RBP17.65■□□□□ 0.42
SMG6-212ENST00000573153 ELF4Q99607 663 aaPredicted RBP17.65■□□□□ 0.42
SMG6-212ENST00000573153 SPON2Q9BUD6 331 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 HDAC8Q9BY41 377 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 PREBQ9HCU5 417 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 CA5BQ9Y2D0 317 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 NEUROG3Q9Y4Z2 214 aa17.65■□□□□ 0.42
SMG6-212ENST00000573153 IGF2RP11717 2491 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms