RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 C22orf39Q6P5X5 142 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 LRSAM1Q6UWE0 723 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 DHRS13Q6UX07 377 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 CCDC185Q8N715 623 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 ZYG11BQ9C0D3 744 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 ERVMER34-1Q9H9K5 563 aa18.51■□□□□ 0.55
CHD3-214ENST00000572579 LIMA1Q9UHB6 759 aaKnown RBP18.51■□□□□ 0.55
CHD3-214ENST00000572579 A0A1W2PQU0 124 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 C1QTNF3-AMACRE9PGA6 284 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 KPNA3O00505 521 aaPredicted RBP18.5■□□□□ 0.55
CHD3-214ENST00000572579 SLC31A1O15431 190 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 RNGTTO60942 597 aaKnown RBP18.5■□□□□ 0.55
CHD3-214ENST00000572579 LEFTY1O75610 366 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 PRLRP16471 622 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 RFC1P35251 1148 aaPredicted RBP18.5■□□□□ 0.55
CHD3-214ENST00000572579 CLCN6P51797 869 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 FGL2Q14314 439 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 CDO1Q16878 200 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 CCDC157Q569K6 752 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 SFMBT2Q5VUG0 894 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 SEL1L3Q68CR1 1132 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 DRC7Q8IY82 874 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 EID2Q8N6I1 236 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 TSC1Q92574 1164 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 OSBPL2Q9H1P3 480 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 PREBQ9HCU5 417 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 FZD3Q9NPG1 666 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 OR12D3Q9UGF7 316 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
CHD3-214ENST00000572579 FCF1Q9Y324 198 aaKnown RBP18.5■□□□□ 0.55
CHD3-214ENST00000572579 PAXBP1Q9Y5B6 917 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 NBEAQ8NFP9 2946 aa18.5■□□□□ 0.55
CHD3-214ENST00000572579 GOLGA4Q13439 2230 aaKnown RBP18.49■□□□□ 0.55
CHD3-214ENST00000572579 ARID1BQ8NFD5 2236 aaPredicted RBP18.49■□□□□ 0.55
CHD3-214ENST00000572579 FAM208BQ5VWN6 2430 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 ITGAVP06756 1048 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 GKP32189 559 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 SERPINH1P50454 418 aaKnown RBP18.49■□□□□ 0.55
CHD3-214ENST00000572579 NRG1Q02297 640 aaPredicted RBP18.49■□□□□ 0.55
CHD3-214ENST00000572579 CLEC16AQ2KHT3 1053 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 ZNF783Q6ZMS7 281 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 SLC25A45Q8N413 288 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 GRIN3AQ8TCU5 1115 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 SKA1Q96BD8 255 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 MYOCQ99972 504 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 HDAC8Q9BY41 377 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 NOL6Q9H6R4 1146 aaKnown RBP18.49■□□□□ 0.55
CHD3-214ENST00000572579 TMEM51Q9NW97 253 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 FTSJ1Q9UET6 329 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 IL36AQ9UHA7 158 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 DMTF1Q9Y222 760 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 DOCK9Q9BZ29 2069 aa18.49■□□□□ 0.55
CHD3-214ENST00000572579 KNTC1P50748 2209 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 TRABD2BA6NFA1 517 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 LGALS16A8MUM7 142 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 PRAMEF26H0Y7S4 382 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 ENC1O14682 589 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 LRIG2O94898 1065 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 HOXB3P14651 431 aaPredicted RBP18.48■□□□□ 0.55
CHD3-214ENST00000572579 STAT1P42224 750 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 PTPN9P43378 593 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 CLDN2P57739 230 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 TMEM259Q4ZIN3 620 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 ACBD5Q5T8D3 534 aaPredicted RBP18.48■□□□□ 0.55
CHD3-214ENST00000572579 WDR59Q6PJI9 974 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 LEKR1Q6ZMV7 388 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
CHD3-214ENST00000572579 IQCHQ86VS3 1027 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 HORMAD1Q86X24 394 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 PHF13Q86YI8 300 aaPredicted RBP18.48■□□□□ 0.55
CHD3-214ENST00000572579 PYROXD2Q8N2H3 581 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 ARHGEF2Q92974 986 aaKnown RBP18.48■□□□□ 0.55
CHD3-214ENST00000572579 CNDP2Q96KP4 475 aaKnown RBP18.48■□□□□ 0.55
CHD3-214ENST00000572579 ATP13A1Q9HD20 1204 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 PTPRBP23467 1997 aa18.48■□□□□ 0.55
CHD3-214ENST00000572579 LOC400499M0QZD8 3231 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 ITPR1Q14643 2758 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 TRIM38O00635 465 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 RAD51BO15315 384 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 SDC3O75056 442 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 LDOC1O95751 146 aaPredicted RBP18.47■□□□□ 0.55
CHD3-214ENST00000572579 PLEKP08567 350 aaPredicted RBP18.47■□□□□ 0.55
CHD3-214ENST00000572579 GIMD1P0DJR0 217 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 ATP1A3P13637 1013 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 SDC4P31431 198 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 ACADVLP49748 655 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 GSCP56915 257 aaPredicted RBP18.47■□□□□ 0.55
CHD3-214ENST00000572579 STAT4Q14765 748 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 SETMARQ53H47 684 aaPredicted RBP18.47■□□□□ 0.55
CHD3-214ENST00000572579 CARD16Q5EG05 197 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 FKBP15Q5T1M5 1219 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 NEK5Q6P3R8 708 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 KDM7AQ6ZMT4 941 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 MON1BQ7L1V2 547 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 STRADAQ7RTN6 431 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 NETO2Q8NC67 525 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 MSANTD4Q8NCY6 345 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 FAM172AQ8WUF8 416 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 ERGIC2Q96RQ1 377 aa18.47■□□□□ 0.55
CHD3-214ENST00000572579 CEP44Q9C0F1 390 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms