RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 WDR59Q6PJI9 974 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 IRF2BP2Q7Z5L9 587 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PRPF39Q86UA1 669 aaKnown RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TBC1D3Q8IZP1 549 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 OXR1Q8N573 874 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SETD7Q8WTS6 366 aaKnown RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 FAM172AQ8WUF8 416 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 VCPIP1Q96JH7 1222 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SERAC1Q96JX3 654 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 PCMTD1Q96MG8 357 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 ELF4Q99607 663 aaPredicted RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 HDAC8Q9BY41 377 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RAB6CQ9H0N0 254 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 TOR4AQ9NXH8 423 aa17.46■□□□□ 0.39
MAP1LC3B-208ENST00000570189 SMTNL1A8MU46 457 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 C1QTNF9BB2RNN3 333 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 K7ERQ8 282 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 MAGEC1O60732 1142 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CD160O95971 181 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 C1QTNF9P0C862 333 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SPINK2P20155 84 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GPD1P21695 349 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RXRGP48443 463 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ZNF143P52747 638 aaPredicted RBP17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GEMIN4P57678 1058 aaKnown RBP17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 NXPH1P58417 271 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ARF5P84085 180 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CDO1Q16878 200 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ANO6Q4KMQ2 910 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SETMARQ53H47 684 aaPredicted RBP17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 LAYNQ6UX15 382 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 OR7D4Q8NG98 312 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 BAP1Q92560 729 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PPP1R16AQ96I34 528 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SELENOOQ9BVL4 669 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 MAGEH1Q9H213 219 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ATP13A1Q9HD20 1204 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 KLK13Q9UKR3 277 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 WASF2Q9Y6W5 498 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 IGF2RP11717 2491 aa17.45■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ZZEF1O43149 2961 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 A0A1W2PQC6 194 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TLR4O00206 839 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CBX4O00257 560 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 WNT9AO14904 365 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 LRIG2O94898 1065 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PLEKP08567 350 aaPredicted RBP17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GLDCP23378 1020 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 L1CAMP32004 1257 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ACAD10Q6JQN1 1059 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 LINGO4Q6UY18 593 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 DPY19L3Q6ZPD9 716 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SLCO6A1Q86UG4 719 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ZSCAN30Q86W11 494 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 MCOLN2Q8IZK6 566 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CCDC185Q8N715 623 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TMEM145Q8NBT3 493 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RHBDD1Q8TEB9 315 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SAP25Q8TEE9 199 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ARHGEF2Q92974 986 aaKnown RBP17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TBC1D31Q96DN5 1066 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 LRIG1Q96JA1 1093 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GDF3Q9NR23 364 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 AASDHPPTQ9NRN7 309 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 IL36AQ9UHA7 158 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 BTBD3Q9Y2F9 522 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 DMXL2Q8TDJ6 3036 aa17.44■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FREM2Q5SZK8 3169 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ZSCAN5CA6NGD5 496 aaPredicted RBP17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 WASH4PA8MWX3 477 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FAM72CH0Y354 149 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PRAMEF26H0Y7S4 382 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 PLK4O00444 970 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TEX33O43247 280 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 TNFSF14O43557 240 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 GJB6O95452 261 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ITGB7P26010 798 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 HTR7P34969 479 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 RECQLP46063 649 aaPredicted RBP17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SHBQ15464 509 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FAM72AQ5TYM5 149 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FAM72DQ6L9T8 149 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 DNAJC24Q6P3W2 148 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ERN2Q76MJ5 926 aaKnown RBP17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 SLFN11Q7Z7L1 901 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FAM72BQ86X60 149 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CHCHD4Q8N4Q1 142 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CHST14Q8NCH0 376 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FAM174AQ8TBP5 190 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ARRDC3Q96B67 414 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CNPY3Q9BT09 278 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 NDFIP2Q9NV92 336 aa17.43■□□□□ 0.38
MAP1LC3B-208ENST00000570189 A0A1B0GTH6 734 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 FAM170AA1A519 330 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 ANKRD62A6NC57 917 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 KPNA3O00505 521 aaPredicted RBP17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 CCP110O43303 1012 aa17.42■□□□□ 0.38
MAP1LC3B-208ENST00000570189 AP1G1O43747 822 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms