RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 MPP6Q9NZW5 540 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.36□□□□□ -0.43
CAPN3-220ENST00000569827 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
CAPN3-220ENST00000569827 TEX51A0A1B0GUA7 166 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 POM121BA6NF01 834 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 TK2O00142 265 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 ALOX15BO15296 676 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 HSF2BPO75031 334 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 TGM2P21980 687 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 HNRNPA2B1P22626 353 aaKnown RBP12.35□□□□□ -0.43
CAPN3-220ENST00000569827 AKT2P31751 481 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 PCBP4P57723 403 aaKnown RBP12.35□□□□□ -0.43
CAPN3-220ENST00000569827 RNASE9P60153 205 aaKnown RBP12.35□□□□□ -0.43
CAPN3-220ENST00000569827 E2F1Q01094 437 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 OVGP1Q12889 678 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 CDKN3Q16667 212 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 PTPN20Q4JDL3 420 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 CDCP2Q5VXM1 449 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 C22orf39Q6P5X5 142 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 OLFML1Q6UWY5 402 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 Q6ZSR6 202 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF248Q8NDW4 579 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 VCPIP1Q96JH7 1222 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 GGT7Q9UJ14 662 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 TPX2Q9ULW0 747 aaKnown RBP12.35□□□□□ -0.43
CAPN3-220ENST00000569827 SATB2Q9UPW6 733 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 HS3ST2Q9Y278 367 aa12.35□□□□□ -0.43
CAPN3-220ENST00000569827 CPED1A4D0V7 1026 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 K7ESM1 405 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 KLK10O43240 276 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 DAB1O75553 588 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 LEFTY1O75610 366 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 SLC2A3P11169 496 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 CKMT1AP12532 417 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 GKP32189 559 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 NUDT1P36639 197 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 SULT1E1P49888 294 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 DNA2P51530 1060 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 CDH4P55283 916 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 TCEA2Q15560 299 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 DEFB133Q30KQ1 61 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 C2CD6Q53TS8 623 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 KIAA1614Q5VZ46 1190 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 GUSBP11Q6P575 273 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 TRIM65Q6PJ69 517 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 DPY19L3Q6ZPD9 716 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 C11orf57Q6ZUT1 292 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-220ENST00000569827 ERN2Q76MJ5 926 aaKnown RBP12.34□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF683Q8IZ20 524 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 RBFAQ8N0V3 343 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 ZNF548Q8NEK5 533 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-220ENST00000569827 OR6K2Q8NGY2 324 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 MAPK15Q8TD08 544 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 KCNE4Q8WWG9 221 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 COL26A1Q96A83 441 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 HIC2Q96JB3 615 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 BMFQ96LC9 184 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 DEPDC7Q96QD5 511 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 TCEAL2Q9H3H9 227 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-220ENST00000569827 DYRK4Q9NR20 520 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 WDR70Q9NW82 654 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 IL36AQ9UHA7 158 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 ITM2BQ9Y287 266 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 BSNQ9UPA5 3926 aa12.34□□□□□ -0.43
CAPN3-220ENST00000569827 A6NNZ2 444 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 CLDN11O75508 207 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 ZNF821O75541 412 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-220ENST00000569827 PAK4O96013 591 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-220ENST00000569827 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-220ENST00000569827 OXCT1P55809 520 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 KRT83P78385 493 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 PAK1Q13153 545 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 MORC3Q14149 939 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 FZD2Q14332 565 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 TMEM259Q4ZIN3 620 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 LRRC73Q5JTD7 316 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 EFHC1Q5JVL4 640 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 PERM1Q5SV97 790 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 EFL1Q7Z2Z2 1120 aaKnown RBP12.33□□□□□ -0.44
CAPN3-220ENST00000569827 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 ATXN7L3BQ96GX2 97 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 TBCBQ99426 244 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 TM6SF2Q9BZW4 377 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 SYNCQ9H7C4 482 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 SYNDIG1Q9H7V2 258 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 ASCL3Q9NQ33 180 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 NLGN3Q9NZ94 848 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 FCF1Q9Y324 198 aaKnown RBP12.33□□□□□ -0.44
CAPN3-220ENST00000569827 COL12A1Q99715 3063 aa12.33□□□□□ -0.44
CAPN3-220ENST00000569827 BICDL2A1A5D9 508 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 AGRPO00253 132 aa12.32□□□□□ -0.44
CAPN3-220ENST00000569827 SPINT1O43278 529 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms