RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TM9SF3	Q9HD45	589 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	TM7SF3	Q9NS93	570 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	IFNK	Q9P0W0	207 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ANGPTL2	Q9UKU9	493 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	PPM1H	Q9ULR3	514 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	FZD10	Q9ULW2	581 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ANKRD6	Q9Y2G4	727 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	PLXNA2	O75051	1894 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	CHD5	Q8TDI0	1954 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	PCDH15	Q96QU1	1955 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	TRPM6	Q9BX84	2022 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782		I6L893	689 aa	Predicted RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	PLRG1	O43660	514 aa	Known RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	BUB1	O43683	1085 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	PCDH8	O95206	1070 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	TRIM16	O95361	564 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	MT-CO1	P00395	513 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ZNF883	P0CG24	379 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	CD38	P28907	300 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ZNF135	P52742	658 aa	Predicted RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	CNTN1	Q12860	1018 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	TRIM14	Q14142	442 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ACAP1	Q15027	740 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	HLA-B	Q31612	363 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	POM121L1P	Q3SYA9	428 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	CARD16	Q5EG05	197 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ARSI	Q5FYB1	569 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ERMARD	Q5T6L9	678 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	PLEKHA7	Q6IQ23	1121 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	NEK5	Q6P3R8	708 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	AADAT	Q8N5Z0	425 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	RTL3	Q8N8U3	475 aa	Known RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	OR2A12	Q8NGT7	310 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	GRIN3A	Q8TCU5	1115 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	FNIP1	Q8TF40	1166 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	CASKIN2	Q8WXE0	1202 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ARHGEF2	Q92974	986 aa	Known RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	ISG20	Q96AZ6	181 aa	Known RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	LRIG1	Q96JA1	1093 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	TNKS2	Q9H2K2	1166 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	TSPY26P	Q9H489	355 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	DEF6	Q9H4E7	631 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	PREB	Q9HCU5	417 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	SERGEF	Q9UGK8	458 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	CAPN11	Q9UMQ6	739 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	AP4E1	Q9UPM8	1137 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	DMTF1	Q9Y222	760 aa		10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	CNOT1	A5YKK6	2376 aa	Known RBP	10.58	□□□□□ -0.72
UBR1-207	ENST00000568782	DOCK9	Q9BZ29	2069 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ARHGAP42	A6NI28	874 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782		K7ERQ8	282 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	EEF2K	O00418	725 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	NEMP1	O14524	444 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	VILL	O15195	856 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	YKT6	O15498	198 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	FLRT2	O43155	660 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	SMAD6	O43541	496 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	KDELR3	O43731	214 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	RNGTT	O60942	597 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	LEFTY1	O75610	366 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	POP4	O95707	220 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ARL4A	P40617	200 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ARRB1	P49407	418 aa	Predicted RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	CCT8	P50990	548 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	NEK3	P51956	506 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	SIM1	P81133	766 aa	Predicted RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PIGH	Q14442	188 aa	Predicted RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	TRIP6	Q15654	476 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PARP15	Q460N3	678 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PPP1R15B	Q5SWA1	713 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	CFAP58	Q5T655	872 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	MANEAL	Q5VSG8	457 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ERN2	Q76MJ5	926 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PSTK	Q8IV42	348 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	NAXD	Q8IW45	347 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PLPP6	Q8IY26	295 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	OXR1	Q8N573	874 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PAF1	Q8N7H5	531 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	OR2I1P	Q8NGU4	316 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ARHGEF26	Q96DR7	871 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	FEM1C	Q96JP0	617 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	CDC6	Q99741	560 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	OSBPL1A	Q9BXW6	950 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	DHX35	Q9H5Z1	703 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ZDHHC6	Q9H6R6	413 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	ZWILCH	Q9H900	591 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	GDF3	Q9NR23	364 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	TAS2R14	Q9NYV8	317 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	HECA	Q9UBI9	543 aa	Predicted RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PCSK1N	Q9UHG2	260 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	APOBEC2	Q9Y235	224 aa	Known RBP	10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	PCDHGB2	Q9Y5G2	931 aa		10.57	□□□□□ -0.72
UBR1-207	ENST00000568782	TCRBV5S1A1T	A0A578	114 aa		10.56	□□□□□ -0.72
UBR1-207	ENST00000568782	TMEM191C	A6NGB0	347 aa		10.56	□□□□□ -0.72
UBR1-207	ENST00000568782	FAM72C	H0Y354	149 aa		10.56	□□□□□ -0.72
UBR1-207	ENST00000568782	PRAMEF26	H0Y7S4	382 aa		10.56	□□□□□ -0.72
UBR1-207	ENST00000568782	KRIT1	O00522	736 aa		10.56	□□□□□ -0.72
UBR1-207	ENST00000568782	DDX3X	O00571	662 aa	Known RBP eCLIP	10.56	□□□□□ -0.72

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