RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 C11orf74Q86VG3 221 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 RCOR2Q8IZ40 523 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CHPFQ8IZ52 775 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 PYROXD2Q8N2H3 581 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CEP112Q8N8E3 955 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ANKRD7Q92527 254 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 TSC1Q92574 1164 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 UBXN4Q92575 508 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 HSPH1Q92598 858 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ALG14Q96F25 216 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 NAPGQ99747 312 aaPredicted RBP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 ZNF670Q9BS34 389 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 PCDH18Q9HCL0 1135 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 FSCN3Q9NQT6 498 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 MPP6Q9NZW5 540 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 CWC15Q9P013 229 aaKnown RBP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 THAP10Q9P2Z0 257 aaPredicted RBP11.31□□□□□ -0.6
LINC01228-201ENST00000567966 GUCA1BQ9UMX6 200 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 PCDHA3Q9Y5H8 950 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 SNX10Q9Y5X0 201 aa11.31□□□□□ -0.6
LINC01228-201ENST00000567966 IGHV1OR15-9A0A0B4J2B8 117 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 TMEM110-MUSTN1A8MSY1 372 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 BUB1O43683 1085 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 RAMP2O60895 175 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 ZRANB2O95218 330 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 KCNK5O95279 499 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 RHOCP08134 193 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 KDELR1P24390 212 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 IL4RP24394 825 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 CD70P32970 193 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 CDH6P55285 790 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 GEMIN4P57678 1058 aaKnown RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 TAS2R40P59535 323 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 COPS2P61201 443 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 GNA12Q03113 381 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 DPYSQ14117 519 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 KRT81Q14533 505 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 CA9Q16790 459 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 PPP6R3Q5H9R7 873 aaPredicted RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 PITRM1Q5JRX3 1037 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 MBLAC2Q68D91 279 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 RETSATQ6NUM9 610 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 METTL3Q86U44 580 aaKnown RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 KATNAL2Q8IYT4 538 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 FAF2Q96CS3 445 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 SPACA7Q96KW9 195 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 KCTD15Q96SI1 283 aaPredicted RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 GABRG3Q99928 467 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 ACE2Q9BYF1 805 aaPredicted RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 MAGEB5Q9BZ81 275 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 SUN2Q9UH99 717 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 CDC23Q9UJX2 597 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 VPS28Q9UK41 221 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 AMFRQ9UKV5 643 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 INTS6Q9UL03 887 aaKnown RBP11.3□□□□□ -0.6
LINC01228-201ENST00000567966 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 TFR2Q9UP52 801 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 NEU3Q9UQ49 428 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 EFR3BQ9Y2G0 817 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 MRFAP1Q9Y605 127 aa11.3□□□□□ -0.6
LINC01228-201ENST00000567966 MACROD2A1Z1Q3 448 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TCF4P15884 667 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
LINC01228-201ENST00000567966 GOT1P17174 413 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 ERCC2P18074 760 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 ITPKAP23677 461 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 CTNNA2P26232 953 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 PMLP29590 882 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 CTNNA1P35221 906 aaKnown RBP11.29□□□□□ -0.6
LINC01228-201ENST00000567966 SERPINB6P35237 376 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 GGCXP38435 758 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 CETN2P41208 172 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 CSKP41240 450 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 IRAK1P51617 712 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 ST8SIA6P61647 398 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 POLD3Q15054 466 aaPredicted RBP11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TAZQ16635 292 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 WHAMMP3Q1A5X7 153 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 SMTNL2Q2TAL5 461 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 DAB2IPQ5VWQ8 1189 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
LINC01228-201ENST00000567966 AFMIDQ63HM1 303 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TMEM215Q68D42 235 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TXNRD3NBQ6F5E7 133 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 PSAPL1Q6NUJ1 521 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TMCO3Q6UWJ1 677 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 PEX26Q7Z412 305 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 TFAP2DQ7Z6R9 452 aa11.29□□□□□ -0.6
LINC01228-201ENST00000567966 SLC41A1Q8IVJ1 513 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms