RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 APTXQ7Z2E3 356 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 GLRX5Q86SX6 157 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 SPATS2Q86XZ4 545 aaKnown RBP12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 PYROXD2Q8N2H3 581 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 RYBPQ8N488 228 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 EID2Q8N6I1 236 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 OR6K2Q8NGY2 324 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 SKA1Q96BD8 255 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 CCDC114Q96M63 670 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 CDC6Q99741 560 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 SELENOOQ9BVL4 669 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 TM6SF2Q9BZW4 377 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 HSD3B7Q9H2F3 369 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 OR12D3Q9UGF7 316 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 APC2O95996 2303 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
GTF3C1-208ENST00000567843 KNTC1P50748 2209 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ALOX15BO15296 676 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 SLC7A4O43246 635 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 PCDHGA12O60330 932 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 SDC3O75056 442 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ZNF821O75541 412 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 LEFTY1O75610 366 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ZMPSTE24O75844 475 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 PCDH8O95206 1070 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 GPD1P21695 349 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 RECQLP46063 649 aaPredicted RBP12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 STAT4Q14765 748 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ARL13BQ3SXY8 428 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ANO6Q4KMQ2 910 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 SLC45A4Q5BKX6 768 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 WDR59Q6PJI9 974 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 DHRS13Q6UX07 377 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 TRIM72Q6ZMU5 477 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 DNAAF5Q86Y56 855 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM131CQ96AQ9 280 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 AGPAT1Q99943 283 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 DYRK4Q9NR20 520 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 FTSJ1Q9UET6 329 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 WASF2Q9Y6W5 498 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ZZEF1O43149 2961 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ZFHX4Q86UP3 3567 aa12.48□□□□□ -0.41
GTF3C1-208ENST00000567843 ACACAQ13085 2346 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM221BA6H8Z2 402 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 TAF4O00268 1085 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CCP110O43303 1012 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 TNFSF14O43557 240 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 LRIG2O94898 1065 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 PRNPP04156 253 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CALB1P05937 261 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 PLEKP08567 350 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 EPHA8P29322 1005 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 PTPN9P43378 593 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 SERPINH1P50454 418 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CLCN6P51797 869 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CCNHP51946 323 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CLDN2P57739 230 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 RPL7AP62424 266 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 MAPK8IP2Q13387 824 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 SETMARQ53H47 684 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CARD16Q5EG05 197 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 MANEALQ5VSG8 457 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 RETSATQ6NUM9 610 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CCNI2Q6ZMN8 369 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 ERN2Q76MJ5 926 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 ARCQ7LC44 396 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 TMIEQ8NEW7 156 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 MDM1Q8TC05 714 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 SAP25Q8TEE9 199 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 CNDP2Q96KP4 475 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 MCEEQ96PE7 176 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 ERGIC2Q96RQ1 377 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 ZDHHC6Q9H6R6 413 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 TAS2R14Q9NYV8 317 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 HECAQ9UBI9 543 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
GTF3C1-208ENST00000567843 LRRC10BA6NIK2 292 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 CREB3O43889 395 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 DFNA5O60443 496 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 LDOC1O95751 146 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 CD160O95971 181 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 MBD3O95983 291 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 THEGLP0DJG4 465 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 RHOQP17081 205 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 ARRB1P49407 418 aaPredicted RBP12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 MON1BQ7L1V2 547 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 STRADAQ7RTN6 431 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 NLRP14Q86W24 1093 aa12.46□□□□□ -0.41
GTF3C1-208ENST00000567843 TRIM69Q86WT6 500 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms