RNA–Protein interactions for RNA: ENST00000567205.1

FANCA-222, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-222ENST00000567205 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
FANCA-222ENST00000567205 VPS45Q9NRW7 570 aa16.7■□□□□ 0.26
FANCA-222ENST00000567205 WSB2Q9NYS7 404 aaPredicted RBP16.7■□□□□ 0.26
FANCA-222ENST00000567205 EPN1Q9Y6I3 576 aaPredicted RBP16.7■□□□□ 0.26
FANCA-222ENST00000567205 KNL1Q8NG31 2342 aa16.7■□□□□ 0.26
FANCA-222ENST00000567205 ADAMTS9Q9P2N4 1935 aa16.7■□□□□ 0.26
FANCA-222ENST00000567205 RASA4BC9J798 803 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 RASA4O43374 803 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 NRDCO43847 1150 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 ERCC2P18074 760 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 IL1R2P27930 398 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 MPLP40238 635 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 PSMD8P48556 350 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 CDH6P55285 790 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 ARF5P84085 180 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 CREB5Q02930 508 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 SERINC3Q13530 473 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 DPYSQ14117 519 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 MESDQ14696 234 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 SF3A2Q15428 464 aaKnown RBP16.69■□□□□ 0.26
FANCA-222ENST00000567205 CA9Q16790 459 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 INO80DQ53TQ3 878 aaPredicted RBP16.69■□□□□ 0.26
FANCA-222ENST00000567205 ODF2Q5BJF6 829 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 KCNT1Q5JUK3 1230 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 WDR45BQ5MNZ6 344 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 ZFYVE27Q5T4F4 411 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 TMCO4Q5TGY1 634 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 VSIG1Q86XK7 387 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 MMAAQ8IVH4 418 aaKnown RBP16.69■□□□□ 0.26
FANCA-222ENST00000567205 STK40Q8N2I9 435 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 TOE1Q96GM8 510 aaKnown RBP16.69■□□□□ 0.26
FANCA-222ENST00000567205 OMDQ99983 421 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 ZNF670Q9BS34 389 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 BTBD1Q9H0C5 482 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 DYRK4Q9NR20 520 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 NDFIP2Q9NV92 336 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
FANCA-222ENST00000567205 SUSD2Q9UGT4 822 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 MBD1Q9UIS9 605 aaPredicted RBP16.69■□□□□ 0.26
FANCA-222ENST00000567205 INVSQ9Y283 1065 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 PLXNA2O75051 1894 aa16.69■□□□□ 0.26
FANCA-222ENST00000567205 BCLAF3A2AJT9 711 aaKnown RBP16.68■□□□□ 0.26
FANCA-222ENST00000567205 MEI4A8MW99 385 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 ZNF487B1APH4 448 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 SLC7A4O43246 635 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 BUB1O43683 1085 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 IL1BP01584 269 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 SLC8A1P32418 973 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 ACVRL1P37023 503 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 NOP2P46087 812 aaKnown RBP16.68■□□□□ 0.26
FANCA-222ENST00000567205 SNRPD1P62314 119 aaKnown RBP16.68■□□□□ 0.26
FANCA-222ENST00000567205 RAD51Q06609 339 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 LRRC38Q5VT99 294 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 DAB2IPQ5VWQ8 1189 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 LINGO4Q6UY18 593 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 HMCESQ96FZ2 354 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 LRIG1Q96JA1 1093 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 CSPG4P5Q96PW8 444 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 MAGEB5Q9BZ81 275 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 LRRC19Q9H756 370 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 PCDH18Q9HCL0 1135 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 FBXL12Q9NXK8 326 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 CABIN1Q9Y6J0 2220 aa16.68■□□□□ 0.26
FANCA-222ENST00000567205 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 SOWAHDA6NJG2 315 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 LRRC72A6NJI9 287 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 TMEM110-MUSTN1A8MSY1 372 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 TM4SF5O14894 197 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 MID1O15344 667 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 BNIP3LO60238 219 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 SEMA4FO95754 770 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 IGSF6O95976 241 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 GSRP00390 522 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 MT-CO1P00395 513 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 GLDCP23378 1020 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 GJC1P36383 396 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 NUMBP49757 651 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 ZNF33AQ06730 810 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 GRM3Q14832 879 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 LRRC49Q8IUZ0 686 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 SYT12Q8IV01 421 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 TMEFF1Q8IYR6 380 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 KCTD6Q8NC69 237 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 TMIEQ8NEW7 156 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 CEP76Q8TAP6 659 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 FAM71BQ8TC56 605 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 HSPA12BQ96MM6 686 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 GDAP1L1Q96MZ0 367 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 KDM4CQ9H3R0 1056 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 MTG2Q9H4K7 406 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 SP110Q9HB58 689 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 HAUS2Q9NVX0 235 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 DDX56Q9NY93 547 aaKnown RBP16.67■□□□□ 0.26
FANCA-222ENST00000567205 UBA2Q9UBT2 640 aaPredicted RBP16.67■□□□□ 0.26
FANCA-222ENST00000567205 SPTBN2O15020 2390 aa16.67■□□□□ 0.26
FANCA-222ENST00000567205 SPOPO43791 374 aa16.66■□□□□ 0.26
FANCA-222ENST00000567205 RNASEH2AO75792 299 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms