RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 EYSQ5T1H1 3165 aa18.01■□□□□ 0.47
HERC2-208ENST00000566635 CBX4O00257 560 aa18■□□□□ 0.47
HERC2-208ENST00000566635 MUSKO15146 869 aa18■□□□□ 0.47
HERC2-208ENST00000566635 SNAP91O60641 907 aa18■□□□□ 0.47
HERC2-208ENST00000566635 GJB3O75712 270 aa18■□□□□ 0.47
HERC2-208ENST00000566635 ARF5P84085 180 aa18■□□□□ 0.47
HERC2-208ENST00000566635 ITKQ08881 620 aa18■□□□□ 0.47
HERC2-208ENST00000566635 GPS2Q13227 327 aa18■□□□□ 0.47
HERC2-208ENST00000566635 PRPSAP1Q14558 356 aa18■□□□□ 0.47
HERC2-208ENST00000566635 LRRC8BQ6P9F7 803 aa18■□□□□ 0.47
HERC2-208ENST00000566635 TMEM25Q86YD3 366 aa18■□□□□ 0.47
HERC2-208ENST00000566635 ST13P5Q8NFI4 369 aaPredicted RBP18■□□□□ 0.47
HERC2-208ENST00000566635 OR52K1Q8NGK4 314 aa18■□□□□ 0.47
HERC2-208ENST00000566635 TTC25Q96NG3 672 aa18■□□□□ 0.47
HERC2-208ENST00000566635 TRIM56Q9BRZ2 755 aaKnown RBP18■□□□□ 0.47
HERC2-208ENST00000566635 LINC00597Q9H2U6 94 aa18■□□□□ 0.47
HERC2-208ENST00000566635 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
HERC2-208ENST00000566635 PRRC2BQ5JSZ5 2229 aaKnown RBP18■□□□□ 0.47
HERC2-208ENST00000566635 SUN1O94901 812 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 OAS2P29728 719 aaKnown RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 SSTR1P30872 391 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 SESN2P58004 480 aaPredicted RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 CRADDP78560 199 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 SARNPP82979 210 aaKnown RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 NIPAL4Q0D2K0 466 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 CCDC38Q502W7 563 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 KLHDC8BQ8IXV7 354 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 EPS8L3Q8TE67 593 aaKnown RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 FGF13Q92913 245 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ARL8AQ96BM9 186 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 UBA2Q9UBT2 640 aaPredicted RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 VPS28Q9UK41 221 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 OR51B4Q9Y5P0 310 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 SPTBN5Q9NRC6 3674 aaKnown RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 SMIM23A6NLE4 172 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 TCF3P15923 654 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 VIPR2P41587 438 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 IFNAR2P48551 515 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 DSC2Q02487 901 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 TNK2Q07912 1038 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ZNF235Q14590 738 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 KRT71Q3SY84 523 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 DNAJC21Q5F1R6 531 aaKnown RBP17.99■□□□□ 0.47
HERC2-208ENST00000566635 FAM78AQ5JUQ0 283 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 MPP7Q5T2T1 576 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 LINGO4Q6UY18 593 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ZNF783Q6ZMS7 281 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ATP11CQ8NB49 1132 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 IPMKQ8NFU5 416 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ALG14Q96F25 216 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 CFAP36Q96G28 342 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 SIGLEC10Q96LC7 697 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ZNF599Q96NL3 588 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 FEM1AQ9BSK4 669 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 MED4Q9NPJ6 270 aa17.99■□□□□ 0.47
HERC2-208ENST00000566635 ERI2A8K979 691 aaKnown RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 CYBBP04839 570 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 ABHD2P08910 425 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 MGAT1P26572 445 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CD70P32970 193 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 LMAN2Q12907 356 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CBLBQ13191 982 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 IHHQ14623 411 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 HSP90B2PQ58FF3 399 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 TTMPQ5BVD1 217 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 RNF43Q68DV7 783 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 PRPF39Q86UA1 669 aaKnown RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 APCDD1Q8J025 514 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 KRT222Q8N1A0 295 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 SLC25A51Q9H1U9 297 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 LRRC40Q9H9A6 602 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 OGFRQ9NZT2 677 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 NEDD8-MDP1E9PL57 170 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 OPA1O60313 960 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 PMPCBO75439 489 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 ZMPSTE24O75844 475 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CPP00450 1065 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 MMP2P08253 660 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 MLNP12872 115 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CD86P42081 329 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 SLCO1A2P46721 670 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 EIF3BP55884 814 aaKnown RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 DLX2Q07687 328 aaPredicted RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 LONRF1Q17RB8 773 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 PALM2Q8IXS6 379 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CELF5Q8N6W0 485 aaKnown RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 IMP4Q96G21 291 aaKnown RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 ASB16Q96NS5 453 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CENPHQ9H3R5 247 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 PLAC1Q9HBJ0 212 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CASS4Q9NQ75 786 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 SYBUQ9NX95 663 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 CLEC1BQ9P126 229 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 VPS51Q9UID3 782 aa17.98■□□□□ 0.47
HERC2-208ENST00000566635 AAR2Q9Y312 384 aaKnown RBP17.98■□□□□ 0.47
HERC2-208ENST00000566635 MYLKQ15746 1914 aa17.97■□□□□ 0.47
HERC2-208ENST00000566635 MIA3Q5JRA6 1907 aa17.97■□□□□ 0.47
HERC2-208ENST00000566635 GOLGA6CA6NDK9 693 aa17.97■□□□□ 0.47
HERC2-208ENST00000566635 TBX10O75333 385 aa17.97■□□□□ 0.47
HERC2-208ENST00000566635 ANXA9O76027 345 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms