RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 RGRP47804 291 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 COPAP53621 1224 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 GNG11P61952 73 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 OTUD4Q01804 1114 aaKnown RBP8.32□□□□□ -1.08
CDH13-208ENST00000566333 IL10RBQ08334 325 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 PPIDQ08752 370 aaKnown RBP8.32□□□□□ -1.08
CDH13-208ENST00000566333 ZBTB17Q13105 803 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 CAMK2GQ13555 558 aaPredicted RBP8.32□□□□□ -1.08
CDH13-208ENST00000566333 TFDP2Q14188 446 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 CRY1Q16526 586 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 TMEM31Q5JXX7 168 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 C9orf64Q5T6V5 341 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 TMCO4Q5TGY1 634 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 MAMSTRQ6ZN01 415 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 TRMT11Q7Z4G4 463 aaKnown RBP8.32□□□□□ -1.08
CDH13-208ENST00000566333 DTWD2Q8NBA8 298 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 CCDC26Q8TAB7 109 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 ACTL9Q8TC94 416 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 COG1Q8WTW3 980 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 MAML1Q92585 1016 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 PTPRN2Q92932 1015 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 FATE1Q969F0 183 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 ERLEC1Q96DZ1 483 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 TSGA13Q96PP4 275 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 QKIQ96PU8 341 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDH13-208ENST00000566333 HHIPQ96QV1 700 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 LGMNQ99538 433 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 FAM118BQ9BPY3 351 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 LRFN3Q9BTN0 628 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 CEP44Q9C0F1 390 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 SP110Q9HB58 689 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 SNX12Q9UMY4 172 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 HEY1Q9Y5J3 304 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 OTOGLQ3ZCN5 2332 aa8.32□□□□□ -1.08
CDH13-208ENST00000566333 ZNF106Q9H2Y7 1883 aaKnown RBP8.32□□□□□ -1.08
CDH13-208ENST00000566333 CACNA1EQ15878 2313 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 TRPM6Q9BX84 2022 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 EDDM13A0A1B0GTR0 161 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 RNF103O00237 685 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 SIN3BO75182 1162 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 GJB3O75712 270 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 EPHX1P07099 455 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 CTSLP07711 333 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 MX2P20592 715 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 NR2C2P49116 596 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 CCR3P51677 355 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 GEMIN4P57678 1058 aaKnown RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 SLC10A7Q0GE19 358 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PDK1Q15118 436 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 CYTH1Q15438 398 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 DLG2Q15700 870 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 INO80DQ53TQ3 878 aaPredicted RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 EOGTQ5NDL2 527 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 FAM182AQ5T1J6 154 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 SEL1L2Q5TEA6 688 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 RETSATQ6NUM9 610 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 B4GALNT4Q76KP1 1039 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 RASSF3Q86WH2 238 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 ZNF354CQ86Y25 554 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 LRRC49Q8IUZ0 686 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PGBD5Q8N414 524 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 RASGEF1CQ8N431 466 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 TEX26Q8N6G2 289 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PCDH20Q8N6Y1 951 aaKnown RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 ATP11CQ8NB49 1132 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 MDGA1Q8NFP4 955 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 OR2A12Q8NGT7 310 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 ATG4AQ8WYN0 398 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 ISG20Q96AZ6 181 aaKnown RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 TRIM44Q96DX7 344 aaPredicted RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 EXOC2Q96KP1 924 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 NSMCE3Q96MG7 304 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 ZNF599Q96NL3 588 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 OSBPL9Q96SU4 736 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 MGME1Q9BQP7 344 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 C1QTNF1Q9BXJ1 281 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 TM6SF2Q9BZW4 377 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 MKRN2Q9H000 416 aaKnown RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 SLC6A17Q9H1V8 727 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 TNKS2Q9H2K2 1166 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PRSS16Q9NQE7 514 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 SPATA6Q9NWH7 488 aaPredicted RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 SMARCAL1Q9NZC9 954 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 UBA2Q9UBT2 640 aaPredicted RBP8.31□□□□□ -1.08
CDH13-208ENST00000566333 HPCAL4Q9UM19 191 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PLA2G4CQ9UP65 541 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 ZNF292O60281 2723 aa8.31□□□□□ -1.08
CDH13-208ENST00000566333 PI4KAP42356 2102 aa8.3□□□□□ -1.08
CDH13-208ENST00000566333 TCRBV21S2A2A0A5A6 115 aa8.3□□□□□ -1.08
CDH13-208ENST00000566333 TARSL2A2RTX5 802 aaKnown RBP8.3□□□□□ -1.08
CDH13-208ENST00000566333 KCNK1O00180 336 aa8.3□□□□□ -1.08
CDH13-208ENST00000566333 PPP1R12AO14974 1030 aaPredicted RBP8.3□□□□□ -1.08
CDH13-208ENST00000566333 ZNF185O15231 689 aa8.3□□□□□ -1.08
CDH13-208ENST00000566333 MATN3O15232 486 aa8.3□□□□□ -1.08
CDH13-208ENST00000566333 ATG13O75143 517 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms