RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 BBS5Q8N3I7 341 aa15.07■□□□□ 0
SPG7-213ENST00000566221 SH2D3CQ8N5H7 860 aa15.07■□□□□ 0
SPG7-213ENST00000566221 ATP11CQ8NB49 1132 aa15.07■□□□□ 0
SPG7-213ENST00000566221 KCNV2Q8TDN2 545 aa15.07■□□□□ 0
SPG7-213ENST00000566221 CYB5D2Q8WUJ1 264 aa15.07■□□□□ 0
SPG7-213ENST00000566221 HTR3CQ8WXA8 447 aa15.07■□□□□ 0
SPG7-213ENST00000566221 SORCS1Q8WY21 1168 aa15.07■□□□□ 0
SPG7-213ENST00000566221 EZH1Q92800 747 aaPredicted RBP15.07■□□□□ 0
SPG7-213ENST00000566221 MAGOHBQ96A72 148 aaKnown RBP15.07■□□□□ 0
SPG7-213ENST00000566221 RPL10LQ96L21 214 aaKnown RBP15.07■□□□□ 0
SPG7-213ENST00000566221 MRGPRX3Q96LB0 322 aa15.07■□□□□ 0
SPG7-213ENST00000566221 LTB4R2Q9NPC1 389 aa15.07■□□□□ 0
SPG7-213ENST00000566221 HAUS2Q9NVX0 235 aa15.07■□□□□ 0
SPG7-213ENST00000566221 SEPT10Q9P0V9 454 aa15.07■□□□□ 0
SPG7-213ENST00000566221 SLC8A2Q9UPR5 921 aa15.07■□□□□ 0
SPG7-213ENST00000566221 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
SPG7-213ENST00000566221 KCNK1O00180 336 aa15.06■□□□□ 0
SPG7-213ENST00000566221 KCNN4O15554 427 aa15.06■□□□□ 0
SPG7-213ENST00000566221 ATP9BO43861 1147 aa15.06■□□□□ 0
SPG7-213ENST00000566221 TMCC1O94876 653 aa15.06■□□□□ 0
SPG7-213ENST00000566221 CD160O95971 181 aa15.06■□□□□ 0
SPG7-213ENST00000566221 SRCP12931 536 aa15.06■□□□□ 0
SPG7-213ENST00000566221 RBL1P28749 1068 aa15.06■□□□□ 0
SPG7-213ENST00000566221 CHRNA3P32297 505 aa15.06■□□□□ 0
SPG7-213ENST00000566221 COILP38432 576 aaPredicted RBP15.06■□□□□ 0
SPG7-213ENST00000566221 HSPA9P38646 679 aaKnown RBP15.06■□□□□ 0
SPG7-213ENST00000566221 KIR2DL1P43626 348 aaPredicted RBP15.06■□□□□ 0
SPG7-213ENST00000566221 MMP13P45452 471 aa15.06■□□□□ 0
SPG7-213ENST00000566221 SEC13P55735 322 aa15.06■□□□□ 0
SPG7-213ENST00000566221 LMNB2Q03252 620 aa15.06■□□□□ 0
SPG7-213ENST00000566221 ZNF234Q14588 700 aa15.06■□□□□ 0
SPG7-213ENST00000566221 PTPRNQ16849 979 aa15.06■□□□□ 0
SPG7-213ENST00000566221 DGKKQ5KSL6 1271 aa15.06■□□□□ 0
SPG7-213ENST00000566221 MARC1Q5VT66 337 aa15.06■□□□□ 0
SPG7-213ENST00000566221 EGFLAMQ63HQ2 1017 aa15.06■□□□□ 0
SPG7-213ENST00000566221 C22orf39Q6P5X5 142 aa15.06■□□□□ 0
SPG7-213ENST00000566221 CCDC137Q6PK04 289 aaKnown RBP15.06■□□□□ 0
SPG7-213ENST00000566221 LEKR1Q6ZMV7 388 aa15.06■□□□□ 0
SPG7-213ENST00000566221 B4GALNT4Q76KP1 1039 aa15.06■□□□□ 0
SPG7-213ENST00000566221 TRMT11Q7Z4G4 463 aaKnown RBP15.06■□□□□ 0
SPG7-213ENST00000566221 ZNF513Q8N8E2 541 aaPredicted RBP15.06■□□□□ 0
SPG7-213ENST00000566221 SPATA4Q8NEY3 305 aa15.06■□□□□ 0
SPG7-213ENST00000566221 GRK7Q8WTQ7 553 aa15.06■□□□□ 0
SPG7-213ENST00000566221 LRRN4Q8WUT4 740 aa15.06■□□□□ 0
SPG7-213ENST00000566221 EDAQ92838 391 aa15.06■□□□□ 0
SPG7-213ENST00000566221 CCDC114Q96M63 670 aa15.06■□□□□ 0
SPG7-213ENST00000566221 RUNDC3BQ96NL0 473 aa15.06■□□□□ 0
SPG7-213ENST00000566221 NELL2Q99435 816 aa15.06■□□□□ 0
SPG7-213ENST00000566221 VAT1Q99536 393 aa15.06■□□□□ 0
SPG7-213ENST00000566221 TMEM121Q9BTD3 319 aa15.06■□□□□ 0
SPG7-213ENST00000566221 CINPQ9BW66 212 aaPredicted RBP15.06■□□□□ 0
SPG7-213ENST00000566221 CEP44Q9C0F1 390 aa15.06■□□□□ 0
SPG7-213ENST00000566221 TBC1D17Q9HA65 648 aa15.06■□□□□ 0
SPG7-213ENST00000566221 RBM12Q9NTZ6 932 aaKnown RBP15.06■□□□□ 0
SPG7-213ENST00000566221 THAP10Q9P2Z0 257 aaPredicted RBP15.06■□□□□ 0
SPG7-213ENST00000566221 SEPT3Q9UH03 358 aa15.06■□□□□ 0
SPG7-213ENST00000566221 AMACRQ9UHK6 382 aa15.06■□□□□ 0
SPG7-213ENST00000566221 DRG1Q9Y295 367 aaKnown RBP15.06■□□□□ 0
SPG7-213ENST00000566221 CTAGE15A4D2H0 777 aa15.05■□□□□ -0
SPG7-213ENST00000566221 SGK1O00141 431 aa15.05■□□□□ -0
SPG7-213ENST00000566221 RNF103O00237 685 aa15.05■□□□□ -0
SPG7-213ENST00000566221 RIOK3O14730 519 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 MT-CO1P00395 513 aa15.05■□□□□ -0
SPG7-213ENST00000566221 CTAGE8P0CG41 777 aa15.05■□□□□ -0
SPG7-213ENST00000566221 CHRM1P11229 460 aaPredicted RBP15.05■□□□□ -0
SPG7-213ENST00000566221 ALADP13716 330 aa15.05■□□□□ -0
SPG7-213ENST00000566221 TARSP26639 723 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 STIP1P31948 543 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 MRPS21P82921 87 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 SLC10A7Q0GE19 358 aa15.05■□□□□ -0
SPG7-213ENST00000566221 ZBTB17Q13105 803 aa15.05■□□□□ -0
SPG7-213ENST00000566221 UBXN2BQ14CS0 331 aa15.05■□□□□ -0
SPG7-213ENST00000566221 HSF5Q4G112 596 aaPredicted RBP15.05■□□□□ -0
SPG7-213ENST00000566221 TTC27Q6P3X3 843 aa15.05■□□□□ -0
SPG7-213ENST00000566221 SERPINA13PQ6UXR4 307 aa15.05■□□□□ -0
SPG7-213ENST00000566221 CTAGE6Q86UF2 777 aa15.05■□□□□ -0
SPG7-213ENST00000566221 CTAGE4Q8IX94 777 aa15.05■□□□□ -0
SPG7-213ENST00000566221 CCDC105Q8IYK2 499 aa15.05■□□□□ -0
SPG7-213ENST00000566221 ZNF687Q8N1G0 1237 aa15.05■□□□□ -0
SPG7-213ENST00000566221 SYNPOQ8N3V7 929 aa15.05■□□□□ -0
SPG7-213ENST00000566221 TEX26Q8N6G2 289 aa15.05■□□□□ -0
SPG7-213ENST00000566221 PCDH20Q8N6Y1 951 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 ISG20Q96AZ6 181 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 RTP4Q96DX8 246 aa15.05■□□□□ -0
SPG7-213ENST00000566221 MYO19Q96H55 970 aa15.05■□□□□ -0
SPG7-213ENST00000566221 PSKH2Q96QS6 385 aa15.05■□□□□ -0
SPG7-213ENST00000566221 IL12RB2Q99665 862 aa15.05■□□□□ -0
SPG7-213ENST00000566221 OSBPL6Q9BZF3 934 aa15.05■□□□□ -0
SPG7-213ENST00000566221 DDX47Q9H0S4 455 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 C10orf88Q9H8K7 445 aa15.05■□□□□ -0
SPG7-213ENST00000566221 USP29Q9HBJ7 922 aa15.05■□□□□ -0
SPG7-213ENST00000566221 FCF1Q9Y324 198 aaKnown RBP15.05■□□□□ -0
SPG7-213ENST00000566221 ACTL7AQ9Y615 435 aa15.05■□□□□ -0
SPG7-213ENST00000566221 K7ERQ8 282 aa15.04■□□□□ -0
SPG7-213ENST00000566221 SMAD6O43541 496 aaKnown RBP15.04■□□□□ -0
SPG7-213ENST00000566221 RNF40O75150 1001 aa15.04■□□□□ -0
SPG7-213ENST00000566221 JCHAINP01591 159 aa15.04■□□□□ -0
SPG7-213ENST00000566221 PTPN3P26045 913 aa15.04■□□□□ -0
SPG7-213ENST00000566221 TIE1P35590 1138 aa15.04■□□□□ -0
SPG7-213ENST00000566221 RHOAP61586 193 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms