RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 ASB12Q8WXK4 309 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 ZCCHC14Q8WYQ9 949 aaKnown RBP15.51■□□□□ 0.07
CMTM3-212ENST00000566121 TSC1Q92574 1164 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 PPP1R16AQ96I34 528 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 VCPIP1Q96JH7 1222 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 CFAP57Q96MR6 1250 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 MAGEH1Q9H213 219 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 AASDHPPTQ9NRN7 309 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 TMEM248Q9NWD8 314 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 MPP6Q9NZW5 540 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 HS3ST3A1Q9Y663 406 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 ATRXP46100 2492 aa15.51■□□□□ 0.07
CMTM3-212ENST00000566121 TCRBV5S1A1TA0A578 114 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 GOLGA6L22H0YM25 854 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 RIOK3O14730 519 aaKnown RBP15.5■□□□□ 0.07
CMTM3-212ENST00000566121 WNT9AO14904 365 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 SMAD6O43541 496 aaKnown RBP15.5■□□□□ 0.07
CMTM3-212ENST00000566121 SNAP91O60641 907 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 RTN2O75298 545 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 GFPT2O94808 682 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 MBD3O95983 291 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 CCDC172P0C7W6 258 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 KRT3P12035 628 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 PPP2CBP62714 309 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 PPP2CAP67775 309 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 STAT4Q14765 748 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 CLEC16AQ2KHT3 1053 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 C22orf39Q6P5X5 142 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 SASS6Q6UVJ0 657 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 ERN2Q76MJ5 926 aaKnown RBP15.5■□□□□ 0.07
CMTM3-212ENST00000566121 HORMAD1Q86X24 394 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 FAM131BQ86XD5 332 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 SLC20A1Q8WUM9 679 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 CASKIN2Q8WXE0 1202 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 RAB7BQ96AH8 199 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 FAM207AQ9NSI2 230 aaPredicted RBP15.5■□□□□ 0.07
CMTM3-212ENST00000566121 ADAM22Q9P0K1 906 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 PLXNB3Q9ULL4 1909 aa15.5■□□□□ 0.07
CMTM3-212ENST00000566121 NYNRINQ9P2P1 1898 aaKnown RBP15.5■□□□□ 0.07
CMTM3-212ENST00000566121 CELSR3Q9NYQ7 3312 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 PLXNA2O75051 1894 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 ZSCAN5CA6NGD5 496 aaPredicted RBP15.49■□□□□ 0.07
CMTM3-212ENST00000566121 WASH4PA8MWX3 477 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 GOLGA8SH3BPF8 625 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 KCNK3O14649 394 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 EPHB6O15197 1021 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 CD160O95971 181 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 ITGB7P26010 798 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 L1CAMP32004 1257 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 HTR7P34969 479 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 GGCXP38435 758 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 RECQLP46063 649 aaPredicted RBP15.49■□□□□ 0.07
CMTM3-212ENST00000566121 NSFP46459 744 aaKnown RBP15.49■□□□□ 0.07
CMTM3-212ENST00000566121 METAP1P53582 386 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 CAMK2BQ13554 666 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 NCAPHQ15003 741 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 SYCP1Q15431 976 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 STX1AQ16623 288 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 ZNF284Q2VY69 593 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 TMEM259Q4ZIN3 620 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 CARD16Q5EG05 197 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 DPY19L3Q6ZPD9 716 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 SPATS2Q86XZ4 545 aaKnown RBP15.49■□□□□ 0.07
CMTM3-212ENST00000566121 PNPLA1Q8N8W4 532 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 NEK11Q8NG66 645 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 LENG8Q96PV6 779 aaPredicted RBP15.49■□□□□ 0.07
CMTM3-212ENST00000566121 PCDHB18PQ96TA0 734 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 BPIFA3Q9BQP9 254 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 HEPHQ9BQS7 1158 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 HSD3B7Q9H2F3 369 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 DYRK4Q9NR20 520 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 GPR27Q9NS67 375 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 KLHL11Q9NVR0 708 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 DONSONQ9NYP3 566 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 FTSJ1Q9UET6 329 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 IL36AQ9UHA7 158 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 NEU3Q9UQ49 428 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 WASF2Q9Y6W5 498 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 PTPRBP23467 1997 aa15.49■□□□□ 0.07
CMTM3-212ENST00000566121 URB1O60287 2271 aaKnown RBP15.48■□□□□ 0.07
CMTM3-212ENST00000566121 CACNA1GO43497 2377 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 K7ERQ8 282 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 TAF4O00268 1085 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 ITGAVP06756 1048 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 RRM1P23921 792 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 RFC1P35251 1148 aaPredicted RBP15.48■□□□□ 0.07
CMTM3-212ENST00000566121 HDAC4P56524 1084 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 YBEYP58557 167 aaPredicted RBP15.48■□□□□ 0.07
CMTM3-212ENST00000566121 ARF5P84085 180 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 INO80DQ53TQ3 878 aaPredicted RBP15.48■□□□□ 0.07
CMTM3-212ENST00000566121 C2CD6Q53TS8 623 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 KIAA1161Q6NSJ0 714 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 LAYNQ6UX15 382 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 TFAP2DQ7Z6R9 452 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 ABI3BPQ7Z7G0 1075 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 EMC1Q8N766 993 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 PDCD7Q8N8D1 485 aaKnown RBP15.48■□□□□ 0.07
CMTM3-212ENST00000566121 OR7D4Q8NG98 312 aa15.48■□□□□ 0.07
CMTM3-212ENST00000566121 RFFLQ8WZ73 363 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms