RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ILVBLA1L0T0 632 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 CD160O95971 181 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 ITGAVP06756 1048 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 ACVRL1P37023 503 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 CAMK2BQ13554 666 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 C6orf118Q5T5N4 469 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 ARCQ7LC44 396 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 ZNF677Q86XU0 584 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 EID2Q8N6I1 236 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 SPON2Q9BUD6 331 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 ZYG11BQ9C0D3 744 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 ZFR2Q9UPR6 939 aaKnown RBP24.27■■□□□ 1.48
RAB40C-209ENST00000565511 PAXBP1Q9Y5B6 917 aa24.27■■□□□ 1.48
RAB40C-209ENST00000565511 MYLKQ15746 1914 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 A0A1W2PQU0 124 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 C2CD4BA6NLJ0 364 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 ENC1O14682 589 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 SERPINH1P50454 418 aaKnown RBP24.26■■□□□ 1.47
RAB40C-209ENST00000565511 COPB1P53618 953 aaKnown RBP24.26■■□□□ 1.47
RAB40C-209ENST00000565511 SYCP1Q15431 976 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 SMAD1Q15797 465 aaKnown RBP24.26■■□□□ 1.47
RAB40C-209ENST00000565511 ZNF284Q2VY69 593 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 ARSIQ5FYB1 569 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 SFMBT2Q5VUG0 894 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 TMEM145Q8NBT3 493 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 MSANTD4Q8NCY6 345 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 TMIEQ8NEW7 156 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 SKA1Q96BD8 255 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 CNDP2Q96KP4 475 aaKnown RBP24.26■■□□□ 1.47
RAB40C-209ENST00000565511 HSD3B7Q9H2F3 369 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 PREBQ9HCU5 417 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 TPX2Q9ULW0 747 aaKnown RBP24.26■■□□□ 1.47
RAB40C-209ENST00000565511 DMTF1Q9Y222 760 aa24.26■■□□□ 1.47
RAB40C-209ENST00000565511 FCF1Q9Y324 198 aaKnown RBP24.26■■□□□ 1.47
RAB40C-209ENST00000565511 SLC31A1O15431 190 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 SDC3O75056 442 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 UNGP13051 313 aaPredicted RBP24.25■■□□□ 1.47
RAB40C-209ENST00000565511 HOXB3P14651 431 aaPredicted RBP24.25■■□□□ 1.47
RAB40C-209ENST00000565511 RXRGP48443 463 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 CLCN6P51797 869 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 GNA12Q03113 381 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 INAVAQ3KP66 663 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 SEL1L3Q68CR1 1132 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 CCDC185Q8N715 623 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 VOPP1Q96AW1 172 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 CCDC86Q9H6F5 360 aaKnown RBP24.25■■□□□ 1.47
RAB40C-209ENST00000565511 ERVMER34-1Q9H9K5 563 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 ATP13A1Q9HD20 1204 aa24.25■■□□□ 1.47
RAB40C-209ENST00000565511 NBEAQ8NFP9 2946 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 LEFTY1O75610 366 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 ADRA1BP35368 520 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 ACADVLP49748 655 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 HDAC4P56524 1084 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 SETMARQ53H47 684 aaPredicted RBP24.24■■□□□ 1.47
RAB40C-209ENST00000565511 SLC45A4Q5BKX6 768 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 APTXQ7Z2E3 356 aaKnown RBP24.24■■□□□ 1.47
RAB40C-209ENST00000565511 IQCHQ86VS3 1027 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 NLRP14Q86W24 1093 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 PPARGC1AQ9UBK2 798 aaKnown RBP24.24■■□□□ 1.47
RAB40C-209ENST00000565511 IL36AQ9UHA7 158 aa24.24■■□□□ 1.47
RAB40C-209ENST00000565511 PRAMEF26H0Y7S4 382 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 LDOC1O95751 146 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-209ENST00000565511 PRNPP04156 253 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 GKP32189 559 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 FGL2Q14314 439 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 ZNF783Q6ZMS7 281 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 ERN2Q76MJ5 926 aaKnown RBP24.23■■□□□ 1.47
RAB40C-209ENST00000565511 HORMAD1Q86X24 394 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 TSC1Q92574 1164 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 CENPIQ92674 756 aaPredicted RBP24.23■■□□□ 1.47
RAB40C-209ENST00000565511 LIMA1Q9UHB6 759 aaKnown RBP24.23■■□□□ 1.47
RAB40C-209ENST00000565511 RAXQ9Y2V3 346 aa24.23■■□□□ 1.47
RAB40C-209ENST00000565511 TRABD2BA6NFA1 517 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 LGALS16A8MUM7 142 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 YKT6O15498 198 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 SDC4P31431 198 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 NUDT1P36639 197 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 STAT1P42224 750 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 PTPN9P43378 593 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 ARRB1P49407 418 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-209ENST00000565511 CLDN2P57739 230 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 NRG1Q02297 640 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-209ENST00000565511 STAT4Q14765 748 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 NCAPHQ15003 741 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 CLEC16AQ2KHT3 1053 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 FKBP15Q5T1M5 1219 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 C19orf48Q6RUI8 117 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 LEKR1Q6ZMV7 388 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 GCNT7Q6ZNI0 430 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 OR13H1Q8NG92 308 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 OR6K2Q8NGY2 324 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 CCDC114Q96M63 670 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 HDAC8Q9BY41 377 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 TM6SF2Q9BZW4 377 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 OR12D3Q9UGF7 316 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 DNAI1Q9UI46 699 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 LHX6Q9UPM6 363 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 FARP1Q9Y4F1 1045 aaPredicted RBP24.22■■□□□ 1.47
RAB40C-209ENST00000565511 GPSM3Q9Y4H4 160 aa24.22■■□□□ 1.47
RAB40C-209ENST00000565511 URB1O60287 2271 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms