RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 LEFTY2O00292 366 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 TRDMT1O14717 391 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 IRF1P10914 325 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 KRT15P19012 456 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 PRKCHP24723 683 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 EPHB2P29323 1055 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 CORO1AP31146 461 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 HOXC13P31276 330 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 MSH2P43246 934 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 SARNPP82979 210 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 USP4Q13107 963 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 QPCTQ16769 361 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 HTR3DQ70Z44 454 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 ZNF567Q8N184 647 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 SH3RF2Q8TEC5 729 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 SLC44A1Q8WWI5 657 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 SGSM3Q96HU1 749 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 C1orf74Q96LT6 269 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 EBNA1BP2Q99848 306 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 FAM107BQ9H098 131 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 GKN1Q9NS71 199 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 NKIRAS1Q9NYS0 192 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 TBC1D14Q9P2M4 693 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 TTLL3Q9Y4R7 772 aa12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 ATXN2Q99700 1313 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-208ENST00000565070 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MTSS1O43312 755 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 PAGE1O75459 146 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MOCS2O96007 188 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 LAMP2P13473 410 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 PTPN3P26045 913 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 IFNAR2P48551 515 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 KCNQ1P51787 676 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 ZNF33AQ06730 810 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 LRRC14Q15048 493 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 KBTBD12Q3ZCT8 623 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 FAM78AQ5JUQ0 283 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MANEALQ5VSG8 457 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 LRRC8BQ6P9F7 803 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 CPLX4Q7Z7G2 160 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 ANKRD42Q8N9B4 389 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 DENND1AQ8TEH3 1009 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 CKAP2Q8WWK9 683 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 SMC6Q96SB8 1091 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 TYROBPO43914 113 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 ACSL4O60488 711 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 PRAMEF12O95522 483 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 CPP00450 1065 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 GARSP41250 739 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 GRIA1P42261 906 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 NRG1Q02297 640 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 ZNF77Q15935 545 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 GKAP1Q5VSY0 366 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 CYS1Q717R9 158 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 DENND1CQ8IV53 801 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 TDRD5Q8NAT2 981 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MGARPQ8TDB4 240 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 ADAMTS19Q8TE59 1207 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 DYDC1Q8WWB3 177 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 OTUB2Q96DC9 234 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MRRFQ96E11 262 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 CFAP36Q96G28 342 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MYADMQ96S97 322 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
NSMCE1-208ENST00000565070 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 A0A1W2PPM1 405 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 KCNK1O00180 336 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 FGF10O15520 208 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PIAS1O75925 651 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 ASMTLO95671 621 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PSMB4P28070 264 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 SMAD2Q15796 467 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 AAK1Q2M2I8 961 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 ADGRF1Q5T601 910 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 Q6ZNB5 142 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PIGWQ7Z7B1 504 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 SRLQ86TD4 932 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PRPF39Q86UA1 669 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 LRRC34Q8IZ02 419 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PDCD7Q8N8D1 485 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 BPIFB1Q8TDL5 484 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 SEC16BQ96JE7 1060 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 VAT1Q99536 393 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 PHF7Q9BWX1 381 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 CEP41Q9BYV8 373 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 SMG9Q9H0W8 520 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 THG1LQ9NWX6 298 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 SEPT10Q9P0V9 454 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 ZNF180Q9UJW8 692 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 TRHDEQ9UKU6 1024 aa12.9□□□□□ -0.34
NSMCE1-208ENST00000565070 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms