RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ETS1P14921 441 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 POLR2EP19388 210 aaKnown RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 TNNT3P45378 269 aaPredicted RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 RPL21P46778 160 aaKnown RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 SERPINH1P50454 418 aaKnown RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 ARF5P84085 180 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 SLC20A2Q08357 652 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 PARP6Q2NL67 630 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 INO80DQ53TQ3 878 aaPredicted RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 TEX26Q8N6G2 289 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 NAT16Q8N8M0 369 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 GLIS1Q8NBF1 620 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 ST13P5Q8NFI4 369 aaPredicted RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 UCMAQ8WVF2 138 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 IFT81Q8WYA0 676 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 MSANTD3Q96H12 275 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 FRMD8Q9BZ67 464 aaPredicted RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 KCNK12Q9HB15 430 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
CLK3-214ENST00000564096 THEGQ9P2T0 379 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 FBXO10Q9UK96 956 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 CLEC4EQ9ULY5 219 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 OR51B4Q9Y5P0 310 aa13.05□□□□□ -0.32
CLK3-214ENST00000564096 ARNTLO00327 626 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 SNAP91O60641 907 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 ANXA9O76027 345 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 TMCC1O94876 653 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 PEX11BO96011 259 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 NFKB1P19838 968 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 TPSB2P20231 275 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 CES1P23141 567 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 PSMB4P28070 264 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 GJA4P35212 333 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 NNMTP40261 264 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 MAPK8P45983 427 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 RHOAP61586 193 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
CLK3-214ENST00000564096 KDSRQ06136 332 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 ITKQ08881 620 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 SLC10A7Q0GE19 358 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 MBLAC2Q68D91 279 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 C12orf40Q86WS4 652 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 APCDD1Q8J025 514 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 TERB1Q8NA31 727 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 ALG14Q96F25 216 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 LMLNQ96KR4 655 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 PSKH2Q96QS6 385 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 PNKPQ96T60 521 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 MGME1Q9BQP7 344 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 FOXP3Q9BZS1 431 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 CIPCQ9C0C6 399 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 CEP44Q9C0F1 390 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 GLOD4Q9HC38 313 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 NT5MQ9NPB1 228 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 GTSE1Q9NYZ3 720 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 PRKAG3Q9UGI9 489 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 ANAPC5Q9UJX4 755 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 RAB21Q9UL25 225 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
CLK3-214ENST00000564096 COL4A3Q01955 1670 aa13.04□□□□□ -0.32
CLK3-214ENST00000564096 DOCK8Q8NF50 2099 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 ZBTB24O43167 697 aaPredicted RBP13.03□□□□□ -0.32
CLK3-214ENST00000564096 PSMD3O43242 534 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 TIMM44O43615 452 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 ZMPSTE24O75844 475 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 IGSF6O95976 241 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 APODP05090 189 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 APRTP07741 180 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 CA4P22748 312 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 GLDCP23378 1020 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 ITGA8P53708 1063 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 NRLP54845 237 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 GEMP55040 296 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 VSNL1P62760 191 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 CDK16Q00536 496 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 BRD3Q15059 726 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 SLC14A2Q15849 920 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 RALGPS1Q5JS13 557 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 RNASEH2BQ5TBB1 312 aaKnown RBP13.03□□□□□ -0.32
CLK3-214ENST00000564096 LINGO4Q6UY18 593 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 LEKR1Q6ZMV7 388 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 KIAA0907Q7Z7F0 614 aaPredicted RBP13.03□□□□□ -0.32
CLK3-214ENST00000564096 PRUNE1Q86TP1 453 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 ATP11CQ8NB49 1132 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 FCRL5Q96RD9 977 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 FMO2Q99518 471 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 RPP25Q9BUL9 199 aaKnown RBP13.03□□□□□ -0.32
CLK3-214ENST00000564096 FSD1LQ9BXM9 530 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 PARD6BQ9BYG5 372 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 SLC25A51Q9H1U9 297 aa13.03□□□□□ -0.32
CLK3-214ENST00000564096 C8orf33Q9H7E9 229 aaPredicted RBP13.03□□□□□ -0.32
CLK3-214ENST00000564096 LRRC40Q9H9A6 602 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms