RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PDE1CQ14123 709 aaPredicted RBP10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 CLPPQ16740 277 aaPredicted RBP10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 MEX3BQ6ZN04 569 aaKnown RBP10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 PHACTR4Q8IZ21 702 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 THAP4Q8WY91 577 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 INPP5DQ92835 1189 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 SPRTNQ9H040 489 aaPredicted RBP10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 SH3GLB2Q9NR46 395 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 TLR8Q9NR97 1041 aaKnown RBP10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 FGF21Q9NSA1 209 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 COMMD8Q9NX08 183 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 ST6GALNAC2Q9UJ37 374 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 BRPF3Q9ULD4 1205 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 PCDHGA6Q9Y5G7 932 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
HDGFL3-204ENST00000563790 SFI1A8K8P3 1242 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 K7ELQ4 463 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 KATNA1O75449 491 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 CELA2BP08218 269 aaPredicted RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 ADD1P35611 737 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 VAMP7P51809 220 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 LIMK2P53671 638 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 SLC5A3P53794 718 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 CNTN1Q12860 1018 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 DSG2Q14126 1118 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 ELAVL3Q14576 367 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 ASIC2Q16515 512 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 SOWAHAQ2M3V2 549 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 HMBOX1Q6NT76 420 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 PODNL1Q6PEZ8 512 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 CEACAM20Q6UY09 585 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 NEK8Q86SG6 692 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 GPR156Q8NFN8 814 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 FDCSPQ8NFU4 85 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 TTC17Q96AE7 1141 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 SMAD5Q99717 465 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 NUDT22Q9BRQ3 303 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 SLC13A1Q9BZW2 595 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 TUFT1Q9NNX1 390 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 CPSF3Q9UKF6 684 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 AGO1Q9UL18 857 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 G3BP2Q9UN86 482 aaKnown RBP10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 GPR34Q9UPC5 381 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
HDGFL3-204ENST00000563790 VWA3AA6NCI4 1184 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 TTC34A8MYJ7 566 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 MDM4O15151 490 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 SLC16A4O15374 487 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 SGSM2O43147 1006 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 CCNT1O60563 726 aaKnown RBP10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 CRLF1O75462 422 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 CDC25AP30304 524 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 MAN1A1P33908 653 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 PBX1P40424 430 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 RCAN1P53805 252 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 B4GALNT1Q00973 533 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 AAMPQ13685 434 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 PCOLCEQ15113 449 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 LONRF1Q17RB8 773 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 EDRF1Q3B7T1 1238 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 MPPE1Q53F39 396 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 TMEM200AQ86VY9 491 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 SFR1Q86XK3 245 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 FAM129CQ86XR2 697 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 DAW1Q8N136 415 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 FSTL5Q8N475 847 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 ZNF518BQ9C0D4 1074 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 ILKAPQ9H0C8 392 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 C5AR2Q9P296 337 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 SNX9Q9Y5X1 595 aa10.94□□□□□ -0.66
HDGFL3-204ENST00000563790 ARGFXA6NJG6 315 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 ASLP04424 464 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 CORO1AP31146 461 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 GLRBP48167 497 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 MDH1BQ5I0G3 518 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 BHLHB9Q6PI77 547 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 HS2ST1Q7LGA3 356 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 LIMS2Q7Z4I7 341 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 BLIDQ8IZY5 108 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 CGRRF1Q99675 332 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 NTPCRQ9BSD7 190 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 OSER1Q9NX31 292 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 ZFR2Q9UPR6 939 aaKnown RBP10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 ABCA1O95477 2261 aa10.93□□□□□ -0.66
HDGFL3-204ENST00000563790 SSU72P8A0A1W2PR75 194 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 M0QYT0 321 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 B4GAT1O43505 415 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 MED24O75448 989 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 ALPIP09923 528 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 CD70P32970 193 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 MC2RQ01718 297 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 ARHGEF7Q14155 803 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 ELOCQ15369 112 aa10.92□□□□□ -0.66
HDGFL3-204ENST00000563790 NPY5RQ15761 445 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms