RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ZNF212Q9UDV6 495 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 GGT7Q9UJ14 662 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CEP83Q9Y592 693 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CSNK1G3Q9Y6M4 447 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 ITPR2Q14571 2701 aa10.62□□□□□ -0.71
SF3B3-204ENST00000563739 CCDC187A0A096LP49 1063 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 A0A1W2PQM1 296 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 CPED1A4D0V7 1026 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 A6NNZ2 444 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 C1QTNF3-AMACRE9PGA6 284 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 AQP9O43315 295 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 TCEA3O75764 348 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 FBXO21O94952 628 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 MOCS3O95396 460 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 TRUB2O95900 331 aaKnown RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 F13A1P00488 732 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 ALPPL2P10696 532 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 RRM1P23921 792 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 SLC5A2P31639 672 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 AKT2P31751 481 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 CHRNA3P32297 505 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 ETV5P41161 510 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 MLLT3P42568 568 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 ABL2P42684 1182 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 PFN3P60673 137 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 FAM46CQ5VWP2 391 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 NEK5Q6P3R8 708 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 TMEM270Q6UE05 265 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 PARGQ86W56 976 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 CEP57L1Q8IYX8 460 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 WDR36Q8NI36 951 aaKnown RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 FUBP1Q96AE4 644 aaKnown RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 KREMEN1Q96MU8 473 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 DDX50Q9BQ39 737 aaKnown RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 LRRC61Q9BV99 259 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 GOLPH3LQ9H4A5 285 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 VPS51Q9UID3 782 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 SALL4Q9UJQ4 1053 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 RCOR1Q9UKL0 485 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 TBC1D30Q9Y2I9 924 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 PCDHGA7Q9Y5G6 932 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 PCDHGA4Q9Y5G9 962 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 ICE1Q9Y2F5 2266 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 SPTBN1Q01082 2364 aaKnown RBP10.61□□□□□ -0.71
SF3B3-204ENST00000563739 UNC13CQ8NB66 2214 aa10.61□□□□□ -0.71
SF3B3-204ENST00000563739 TYW5A2RUC4 315 aaKnown RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 E5RJQ4 531 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 F5H5T6 163 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 KPNA3O00505 521 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 MUSKO15146 869 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 CD160O95971 181 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 AFPP02771 609 aaKnown RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 UGT1A5P35504 534 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 IGFALSP35858 605 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ME1P48163 572 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ARSDP51689 593 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 HNRNPKP61978 463 aaKnown RBP eCLIP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 CYP4F2P78329 520 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 TLE1Q04724 770 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 DNM1Q05193 864 aaKnown RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 SULT2A1Q06520 285 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 AUHQ13825 339 aaKnown RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 TBR1Q16650 682 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ALFQ53S48 1182 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 C22orf39Q6P5X5 142 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 FOXR1Q6PIV2 292 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ATG14Q6ZNE5 492 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ERN2Q76MJ5 926 aaKnown RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 PARS2Q7L3T8 475 aaKnown RBP10.6□□□□□ -0.71
SF3B3-204ENST00000563739 TMPRSS9Q7Z410 1059 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 DSG4Q86SJ6 1040 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 VASH2Q86V25 355 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 CCDC150Q8NCX0 1101 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 TMIEQ8NEW7 156 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 FAM149B1Q96BN6 582 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 GRAMD1AQ96CP6 724 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 SGF29Q96ES7 293 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 SLC2A13Q96QE2 648 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 SEMA3CQ99985 751 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 CCDC3Q9BQI4 270 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 DUSP23Q9BVJ7 150 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 HDAC8Q9BY41 377 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ACP6Q9NPH0 428 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 FOXJ2Q9P0K8 574 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ITM2BQ9Y287 266 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 FADS3Q9Y5Q0 445 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 SNX10Q9Y5X0 201 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 ACTL7AQ9Y615 435 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 HS3ST4Q9Y661 456 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 HS3ST3A1Q9Y663 406 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 FBN2P35556 2912 aa10.6□□□□□ -0.71
SF3B3-204ENST00000563739 D6RAR5 112 aa10.59□□□□□ -0.71
SF3B3-204ENST00000563739 TPP1O14773 563 aa10.59□□□□□ -0.71
SF3B3-204ENST00000563739 PLD2O14939 933 aa10.59□□□□□ -0.71
SF3B3-204ENST00000563739 BNIP3LO60238 219 aa10.59□□□□□ -0.71
SF3B3-204ENST00000563739 ZMPSTE24O75844 475 aa10.59□□□□□ -0.71
SF3B3-204ENST00000563739 APOEP02649 317 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms