RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 HNRNPDQ14103 355 aaKnown RBP9.9□□□□□ -0.82
UBFD1-202ENST00000563366 RAB30Q15771 203 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 KYNUQ16719 465 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 KLHL38Q2WGJ6 581 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ANKRD22Q5VYY1 191 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ARMC3Q5W041 872 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 TRIM46Q7Z4K8 759 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 LINC00523Q86TU6 105 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ARHGAP12Q8IWW6 846 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 PALM2Q8IXS6 379 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ALDH16A1Q8IZ83 802 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 BBS5Q8N3I7 341 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 FAM76AQ8TAV0 307 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 CELF6Q96J87 481 aaKnown RBP9.9□□□□□ -0.82
UBFD1-202ENST00000563366 TEKT5Q96M29 485 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ZNF599Q96NL3 588 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 SLC39A8Q9C0K1 460 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 SAP130Q9H0E3 1048 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 MAGEH1Q9H213 219 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 VPS37BQ9H9H4 285 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 SP110Q9HB58 689 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 TMBIM4Q9HC24 238 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 ZDHHC7Q9NXF8 308 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 MPP6Q9NZW5 540 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 VPS18Q9P253 973 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 SNX10Q9Y5X0 201 aa9.9□□□□□ -0.82
UBFD1-202ENST00000563366 MIA3Q5JRA6 1907 aa9.9□□□□□ -0.83
UBFD1-202ENST00000563366 NUP210Q8TEM1 1887 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 C2orf78A6NCI8 922 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 RASA4BC9J798 803 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 H3BNC9 293 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 GOLGA8MH3BSY2 632 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 RGS16O15492 202 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 RASA4O43374 803 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SUN1O94901 812 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 METTL18O95568 372 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 AP2A1O95782 977 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 AGTP01019 485 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 CA3P07451 260 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SPATA31D3P0C874 917 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 PSMB4P28070 264 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 STX2P32856 288 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 MAGEA3P43357 314 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 KCNQ1P51787 676 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 EPHA5P54756 1037 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SLC7A9P82251 487 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SMAD3P84022 425 aaKnown RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 POU4F2Q12837 409 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 POLD3Q15054 466 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 RASA2Q15283 850 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 FAM133BQ5BKY9 247 aaKnown RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 COX20Q5RI15 118 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 NAPEPLDQ6IQ20 393 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 LRRC8BQ6P9F7 803 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF783Q6ZMS7 281 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SPATA31D4Q6ZUB0 917 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 B4GALNT4Q76KP1 1039 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 TAOK1Q7L7X3 1001 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 TFAP2DQ7Z6R9 452 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 C14orf80Q86SX3 495 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 TMEM150AQ86TG1 271 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SETD3Q86TU7 594 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 TMC8Q8IU68 726 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 DENND1CQ8IV53 801 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 CCDC117Q8IWD4 279 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 LGI2Q8N0V4 545 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF557Q8N988 423 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 HJURPQ8NCD3 748 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 MAML1Q92585 1016 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 C9orf72Q96LT7 481 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 IL12RB2Q99665 862 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 CENPHQ9H3R5 247 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 LRRC40Q9H9A6 602 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 MAN1C1Q9NR34 630 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 IPO11Q9UI26 975 aaKnown RBP9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SLC24A2Q9UI40 661 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 MSRAQ9UJ68 235 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 SH3BP1Q9Y3L3 701 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 TEX264Q9Y6I9 313 aa9.89□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 EXOC1LA0A1B0GW35 172 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ILVBLA1L0T0 632 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 HIDE1A8MVS5 230 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF197O14709 1029 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 CPP00450 1065 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 JCHAINP01591 159 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 AVPR1AP37288 418 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 MAGEA10P43363 369 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 PAPOLAP51003 745 aaKnown RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 NRLP54845 237 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 GEMP55040 296 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 OXCT1P55809 520 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 TNK2Q07912 1038 aa9.88□□□□□ -0.83
UBFD1-202ENST00000563366 ZNF177Q13360 481 aaPredicted RBP9.88□□□□□ -0.83
UBFD1-202ENST00000563366 GPM6BQ13491 265 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms