RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 SMOC2Q9H3U7 446 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 TMEM8AQ9HCN3 771 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 HCFC1R1Q9NWW0 138 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 PLA2G3Q9NZ20 509 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 SAE1Q9UBE0 346 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-205ENST00000563283 LIMA1Q9UHB6 759 aaKnown RBP5.43□□□□□ -1.54
CNOT1-205ENST00000563283 FBXW11Q9UKB1 542 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 ITGA11Q9UKX5 1188 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 L1RE1Q9UN81 338 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 AGAP1Q9UPQ3 857 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 MYO10Q9HD67 2058 aa5.43□□□□□ -1.54
CNOT1-205ENST00000563283 GREB1Q4ZG55 1949 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ARHGEF37A1IGU5 675 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 GOLGA6L3A6NEY3 463 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 CYB561D2O14569 222 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 MOSPD3O75425 235 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 SOAT2O75908 522 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ASMTLO95671 621 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 GLUD1P00367 558 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 JMJD7P0C870 316 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 HOXB8P17481 243 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 TYMPP19971 482 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 CA8P35219 290 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 MSX2P35548 267 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 CCR2P41597 374 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ARPP19P56211 112 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 UBASH3AP57075 661 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 MYL6P60660 151 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 RBP5P82980 135 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 UBXN1Q04323 297 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 LRMPQ12912 555 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ELAVL2Q12926 359 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 FOXE3Q13461 319 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ZNF699Q32M78 642 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ZACNQ401N2 412 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 FILIP1LQ4L180 1135 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 USP39Q53GS9 565 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 FKBP15Q5T1M5 1219 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 KIAA1841Q6NSI8 718 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 USP51Q70EK9 711 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 UBE2R2Q712K3 238 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ADGRE4PQ86SQ3 457 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ADHFE1Q8IWW8 467 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 TCEAL8Q8IYN2 117 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 PDCL2Q8N4E4 241 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 CCDC150Q8NCX0 1101 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 FBXL13Q8NEE6 735 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ZNF461Q8TAF7 563 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 HDAC7Q8WUI4 952 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 CASP10Q92851 521 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 SEMA4DQ92854 862 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 GFM2Q969S9 779 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ZNF503Q96F45 646 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 HPDLQ96IR7 371 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ZNF560Q96MR9 790 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 SORCS2Q96PQ0 1159 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 UHRF1Q96T88 793 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 MRPL45Q9BRJ2 306 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 ORAI3Q9BRQ5 295 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 PI4K2AQ9BTU6 479 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 LSM14BQ9BX40 385 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 IMPG2Q9BZV3 1241 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 INTS2Q9H0H0 1204 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 EPHX3Q9H6B9 360 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 TMEM30AQ9NV96 361 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 INTS7Q9NVH2 962 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 GDAP2Q9NXN4 497 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 IFNKQ9P0W0 207 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 GCNT4Q9P109 453 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 CEP72Q9P209 647 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 DNMT3BQ9UBC3 853 aaKnown RBP5.42□□□□□ -1.54
CNOT1-205ENST00000563283 STK39Q9UEW8 545 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 COL4A3Q01955 1670 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 PTPRDP23468 1912 aa5.42□□□□□ -1.54
CNOT1-205ENST00000563283 VPS13AQ96RL7 3174 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 OBSL1O75147 1896 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 DENND4CQ5VZ89 1909 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 MYBPHLA2RUH7 354 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 C2CD4DB7Z1M9 353 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 CCL16O15467 120 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 TEX33O43247 280 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 TRAPPC3O43617 180 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 H2AFYO75367 372 aaKnown RBP5.41□□□□□ -1.54
CNOT1-205ENST00000563283 ASS1P00966 412 aaKnown RBP5.41□□□□□ -1.54
CNOT1-205ENST00000563283 TPM3P06753 285 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 ATF6P18850 670 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 SP100P23497 879 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-205ENST00000563283 ACAT1P24752 427 aaKnown RBP5.41□□□□□ -1.54
CNOT1-205ENST00000563283 ACRV1P26436 265 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 PNPLA4P41247 253 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 TAF6P49848 677 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 KLK7P49862 253 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 CACNA2D1P54289 1103 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 CDH8P55286 799 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 TNNC1P63316 161 aa5.41□□□□□ -1.54
CNOT1-205ENST00000563283 NOP14P78316 857 aaKnown RBP5.41□□□□□ -1.54
CNOT1-205ENST00000563283 APBA1Q02410 837 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms