RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ACVR1CQ8NER5 493 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 E2F7Q96AV8 911 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 PABPC5Q96DU9 382 aaKnown RBP19.42■□□□□ 0.7
SMPD3-203ENST00000563226 SNX15Q9NRS6 342 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 MTO1Q9Y2Z2 717 aaKnown RBP19.42■□□□□ 0.7
SMPD3-203ENST00000563226 TTC24A2A3L6 582 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-203ENST00000563226 NEBLO76041 1014 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 GJB5O95377 273 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 RING1Q06587 406 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 TTC31Q49AM3 519 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-203ENST00000563226 PKN3Q6P5Z2 889 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 ZCCHC23Q6ZST2 131 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 CLSTN3Q9BQT9 956 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 MCMBPQ9BTE3 642 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 OXCT2Q9BYC2 517 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-203ENST00000563226 CAB39LQ9H9S4 337 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 KCNK13Q9HB14 408 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 ZNF358Q9NW07 568 aa19.42■□□□□ 0.7
SMPD3-203ENST00000563226 A0A0G2JND7 137 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 AP3B1O00203 1094 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 GLRA3O75311 464 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 RASSF9O75901 435 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 TYK2P29597 1187 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 ACVRL1P37023 503 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 MAGEA12P43365 314 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 TMPRSS15P98073 1019 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 HNRNPDQ14103 355 aaKnown RBP19.41■□□□□ 0.7
SMPD3-203ENST00000563226 PCID2Q5JVF3 399 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 KDELC1Q6UW63 502 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 ZNF354CQ86Y25 554 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 ISL2Q96A47 359 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 FSD1LQ9BXM9 530 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 C20orf27Q9GZN8 174 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 SP110Q9HB58 689 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 SLC2A6Q9UGQ3 507 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 TBX21Q9UL17 535 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 TRIM33Q9UPN9 1127 aa19.41■□□□□ 0.7
SMPD3-203ENST00000563226 C2orf71A6NGG8 1288 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 PLIN3O60664 434 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 TACR2P21452 398 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 SPRP35270 261 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 WNT3AP56704 352 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 MPP3Q13368 585 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 IKBKEQ14164 716 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 DLG2Q15700 870 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 ESRP1Q6NXG1 681 aaKnown RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 FAM117BQ6P1L5 589 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 RFWD3Q6PCD5 774 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 RANBP10Q6VN20 620 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 KYAT3Q6YP21 454 aaKnown RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 CFAP52Q8N1V2 620 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 LRRC37BQ96QE4 947 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 TRIM55Q9BYV6 548 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 SLC25A51Q9H1U9 297 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 ENTPD7Q9NQZ7 604 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 ATP11BQ9Y2G3 1177 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 BACE2Q9Y5Z0 518 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 PARNO95453 639 aaKnown RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 IL1BP01584 269 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 MMP2P08253 660 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 DNAJB2P25686 324 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 ARNTP27540 789 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 SLC6A4P31645 630 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 DSC2Q02487 901 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 FASTKD1Q53R41 847 aaKnown RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 FAM43BQ6ZT52 329 aaPredicted RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 PLD6Q8N2A8 252 aaKnown RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 PGBD5Q8N414 524 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 IMP4Q96G21 291 aaKnown RBP19.4■□□□□ 0.7
SMPD3-203ENST00000563226 TMEM216Q9P0N5 145 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 TCAF1Q9Y4C2 921 aa19.4■□□□□ 0.7
SMPD3-203ENST00000563226 CHD5Q8TDI0 1954 aa19.39■□□□□ 0.7
SMPD3-203ENST00000563226 RAMP2O60895 175 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 DLDP09622 509 aaKnown RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 HMGA1P17096 107 aaKnown RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 CD86P42081 329 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 SERPINB8P50452 374 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 RENBPP51606 427 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 PGGT1BP53609 377 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 OCRLQ01968 901 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 ITKQ08881 620 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 SETDB1Q15047 1291 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 POLD3Q15054 466 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 STXBP5Q5T5C0 1151 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 MARC1Q5VT66 337 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 KIAA1841Q6NSI8 718 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 CNKSR3Q6P9H4 555 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 LGI2Q8N0V4 545 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 SLC25A41Q8N5S1 370 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF398Q8TD17 642 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF512Q96ME7 567 aaPredicted RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 TOX2Q96NM4 488 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 LTBP2Q14767 1821 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 LAMA2P24043 3122 aaKnown RBP19.39■□□□□ 0.69
SMPD3-203ENST00000563226 BIRC5O15392 142 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 GJB3O75712 270 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 DCTN3O75935 186 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 TGDSO95455 350 aa19.39■□□□□ 0.69
SMPD3-203ENST00000563226 PROCP04070 461 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms