RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 DLG2Q15700 870 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 CDKN3Q16667 212 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 C5orf22Q49AR2 442 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 ZC3H12AQ5D1E8 599 aaKnown RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 PERM1Q5SV97 790 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 SYPL2Q5VXT5 272 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 RAP1GAP2Q684P5 730 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 Q6ZSR6 202 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 Q6ZVU0 165 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 EFL1Q7Z2Z2 1120 aaKnown RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 TMIEQ8NEW7 156 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 OR2A12Q8NGT7 310 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 ARRDC3Q96B67 414 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 TBATAQ96M53 351 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 LENG8Q96PV6 779 aaPredicted RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 KLF6Q99612 283 aaPredicted RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 SRRTQ9BXP5 876 aaKnown RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 CALN1Q9BXU9 219 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 FZD3Q9NPG1 666 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 ANKMY1Q9P2S6 941 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 USP25Q9UHP3 1055 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 HPSEQ9Y251 543 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 TBC1D30Q9Y2I9 924 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 CEP83Q9Y592 693 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 UNC79Q9P2D8 2635 aa8.53□□□□□ -1.04
CKLF-208ENST00000563092 USP9YO00507 2555 aaPredicted RBP8.53□□□□□ -1.04
CKLF-208ENST00000563092 FAM237AA0A1B0GTK4 181 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 PIK3R2O00459 728 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 RAD51BO15315 384 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 SPINT1O43278 529 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 SART1O43290 800 aaKnown RBP8.52□□□□□ -1.05
CKLF-208ENST00000563092 AQP9O43315 295 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 MOCS2O96007 188 aaPredicted RBP8.52□□□□□ -1.05
CKLF-208ENST00000563092 SFTPCP11686 197 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 SRCP12931 536 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 TBXAS1P24557 533 aaPredicted RBP8.52□□□□□ -1.05
CKLF-208ENST00000563092 GPD2P43304 727 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 INHBCP55103 352 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 CCDC15Q0P6D6 951 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 DPYDQ12882 1025 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 STILQ15468 1287 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 MEA1Q16626 185 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 ZNF542PQ5EBM4 170 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 TPRG1LQ5T0D9 272 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 SEL1L3Q68CR1 1132 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 ATL3Q6DD88 541 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 FBXL22Q6P050 247 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 PARGQ86W56 976 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 CHSY1Q86X52 802 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 STK32AQ8WU08 396 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 KLK6Q92876 244 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.05
CKLF-208ENST00000563092 SGF29Q96ES7 293 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 PPP1R9BQ96SB3 815 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 MYOCQ99972 504 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.52□□□□□ -1.05
CKLF-208ENST00000563092 DNAJC28Q9NX36 388 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 RCOR1Q9UKL0 485 aa8.52□□□□□ -1.05
CKLF-208ENST00000563092 HEMK1Q9Y5R4 338 aaPredicted RBP8.52□□□□□ -1.05
CKLF-208ENST00000563092 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 CPED1A4D0V7 1026 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 LMO7DNF2Z398 122 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 F5H5T6 163 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 H3BM21 787 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 PLD2O14939 933 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 PMM2O15305 246 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 AP1G1O43747 822 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ZNF821O75541 412 aaPredicted RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 GCATO75600 419 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 TRUB2O95900 331 aaKnown RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 MT-CO1P00395 513 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 APOEP02649 317 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 GP1BBP13224 206 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 SLC5A2P31639 672 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 CHRNA3P32297 505 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 RABIFP47224 123 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ME1P48163 572 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 IRAK1P51617 712 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 PFN3P60673 137 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 PITX1P78337 314 aaPredicted RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 NFKB2Q00653 900 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 EIF2B5Q13144 721 aaKnown RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 EIF3IQ13347 325 aaKnown RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 NR0B2Q15466 257 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ZSCAN23Q3MJ62 389 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 OR6B2Q6IFH4 312 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 KIAA1161Q6NSJ0 714 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ERN2Q76MJ5 926 aaKnown RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 TMEM110Q86TL2 294 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ZSCAN30Q86W11 494 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 CIR1Q86X95 450 aaPredicted RBP8.51□□□□□ -1.05
CKLF-208ENST00000563092 SLC35F3Q8IY50 421 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 LMO3Q8TAP4 145 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 ASB12Q8WXK4 309 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 EXTL1Q92935 676 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 NAT6Q93015 286 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 SLC35C1Q96A29 364 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 VOPP1Q96AW1 172 aa8.51□□□□□ -1.05
CKLF-208ENST00000563092 PSMB7Q99436 277 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms