RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ATP13A1Q9HD20 1204 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 DONSONQ9NYP3 566 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 UVRAGQ9P2Y5 699 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 PCSK1NQ9UHG2 260 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 VPS51Q9UID3 782 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 SCML1Q9UN30 329 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 NBEAQ8NFP9 2946 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 FAM221BA6H8Z2 402 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 MYO1FO00160 1098 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 FGF10O15520 208 aaPredicted RBP16.93■□□□□ 0.3
CDT1-202ENST00000562747 SH3BP5O60239 455 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 SNAP91O60641 907 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 DNTTP04053 509 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 TMEM253P0C7T8 217 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 CD6P30203 668 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 TPMTP51580 245 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 CLCN6P51797 869 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 TPI1P60174 286 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 RPS14P62263 151 aaKnown RBP16.93■□□□□ 0.3
CDT1-202ENST00000562747 SLC20A2Q08357 652 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 CYP4V2Q6ZWL3 525 aaPredicted RBP16.93■□□□□ 0.3
CDT1-202ENST00000562747 RABEPKQ7Z6M1 372 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 ACE2Q9BYF1 805 aaPredicted RBP16.93■□□□□ 0.3
CDT1-202ENST00000562747 DHX35Q9H5Z1 703 aaKnown RBP16.93■□□□□ 0.3
CDT1-202ENST00000562747 NDFIP2Q9NV92 336 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 GPATCH2LQ9NWQ4 482 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 DNAI1Q9UI46 699 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 LCMT1Q9UIC8 334 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 LHX6Q9UPM6 363 aa16.93■□□□□ 0.3
CDT1-202ENST00000562747 PLXNB3Q9ULL4 1909 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 CHD5Q8TDI0 1954 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 RAMP2O60895 175 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 NDUFS2O75306 463 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 ZMPSTE24O75844 475 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 SRCP12931 536 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 MAOBP27338 520 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 SFSWAPQ12872 951 aaKnown RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 ELAVL3Q14576 367 aaKnown RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 DLG2Q15700 870 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 TTC31Q49AM3 519 aaPredicted RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 ACCSLQ4AC99 568 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 BOLA3Q53S33 107 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 RETSATQ6NUM9 610 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 CACUL1Q86Y37 369 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 ATP11CQ8NB49 1132 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 ARHGEF2Q92974 986 aaKnown RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 ZNF419Q96HQ0 510 aaPredicted RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 BTBD6Q96KE9 485 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 SPON2Q9BUD6 331 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 PACSIN1Q9BY11 444 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 WSB2Q9NYS7 404 aaPredicted RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 CTTNBP2NLQ9P2B4 639 aa16.92■□□□□ 0.3
CDT1-202ENST00000562747 NYNRINQ9P2P1 1898 aaKnown RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 ANKRD11Q6UB99 2663 aaPredicted RBP16.92■□□□□ 0.3
CDT1-202ENST00000562747 CBX4O00257 560 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 EEF2KO00418 725 aaKnown RBP16.91■□□□□ 0.3
CDT1-202ENST00000562747 ALOX15BO15296 676 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 TRIM16O95361 564 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 MT-CO1P00395 513 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 YBEYP58557 167 aaPredicted RBP16.91■□□□□ 0.3
CDT1-202ENST00000562747 GRIK2Q13002 908 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 POLD3Q15054 466 aaPredicted RBP16.91■□□□□ 0.3
CDT1-202ENST00000562747 CA9Q16790 459 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 USP30Q70CQ3 517 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 RGL4Q8IZJ4 473 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 STK40Q8N2I9 435 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 PNPLA1Q8N8W4 532 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 TEKT4Q8WW24 435 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 TOE1Q96GM8 510 aaKnown RBP16.91■□□□□ 0.3
CDT1-202ENST00000562747 CCDC114Q96M63 670 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 KCTD15Q96SI1 283 aaPredicted RBP16.91■□□□□ 0.3
CDT1-202ENST00000562747 FAM129BQ96TA1 746 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 INTUQ9ULD6 942 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 HPCAL4Q9UM19 191 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 ADAMTS20P59510 1910 aa16.91■□□□□ 0.3
CDT1-202ENST00000562747 ADH1BP00325 375 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 SYPP08247 313 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 FTH1P19P0C7X4 201 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 VAV1P15498 845 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 GLDCP23378 1020 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 IL1R2P27930 398 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 ACVRL1P37023 503 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 HCAR3P49019 387 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 SERPINH1P50454 418 aaKnown RBP16.9■□□□□ 0.3
CDT1-202ENST00000562747 GEMIN4P57678 1058 aaKnown RBP16.9■□□□□ 0.3
CDT1-202ENST00000562747 ARF5P84085 180 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 TRIP6Q15654 476 aaKnown RBP16.9■□□□□ 0.3
CDT1-202ENST00000562747 CST6Q15828 149 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 DPYSL2Q16555 572 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 ZNF423Q2M1K9 1284 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 LINGO4Q6UY18 593 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 DSG4Q86SJ6 1040 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 PROSER1Q86XN7 944 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 MMAAQ8IVH4 418 aaKnown RBP16.9■□□□□ 0.3
CDT1-202ENST00000562747 NAXDQ8IW45 347 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 UMODL1-AS1Q8N2C9 162 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 CADM4Q8NFZ8 388 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 OR8D1Q8WZ84 308 aa16.9■□□□□ 0.3
CDT1-202ENST00000562747 FOXJ1Q92949 421 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms