RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 FRMD6Q96NE9 622 aa6.16□□□□□ -1.42
TCF4-213ENST00000562543 SRRTQ9BXP5 876 aaKnown RBP6.16□□□□□ -1.42
TCF4-213ENST00000562543 FOXP3Q9BZS1 431 aa6.16□□□□□ -1.42
TCF4-213ENST00000562543 RNF38Q9H0F5 515 aa6.16□□□□□ -1.42
TCF4-213ENST00000562543 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
TCF4-213ENST00000562543 SMPD4Q9NXE4 827 aa6.16□□□□□ -1.42
TCF4-213ENST00000562543 TLK1Q9UKI8 766 aa6.16□□□□□ -1.42
TCF4-213ENST00000562543 HIVEP2P31629 2446 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 A0A0D9SFI3 127 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 hCG_1642624A0A1W2PR95 340 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 TARSL2A2RTX5 802 aaKnown RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 OR14I1A6ND48 311 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 D6RAR5 112 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 SCAMP1O15126 338 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 KRT86O43790 486 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 SMARCA5O60264 1052 aaPredicted RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 MAGEC1O60732 1142 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 PSMD10O75832 226 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 HTR1EP28566 365 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 UGT1A3P35503 534 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 ARL2P36404 184 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 CCR5P51681 352 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 COPB1P53618 953 aaKnown RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 MAPK10P53779 464 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 GALCP54803 685 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 CDH8P55286 799 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 KRT83P78385 493 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 CAMK2GQ13555 558 aaPredicted RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 ZNF234Q14588 700 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 SAFBQ15424 915 aaKnown RBP eCLIP6.15□□□□□ -1.42
TCF4-213ENST00000562543 CLEC16AQ2KHT3 1053 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 TMEM201Q5SNT2 666 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 LRCH2Q5VUJ6 765 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 WWC2Q6AWC2 1192 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 NAPEPLDQ6IQ20 393 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 ZPBP2Q6X784 338 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 HEATR3Q7Z4Q2 680 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 DDX42Q86XP3 938 aaKnown RBP eCLIP6.15□□□□□ -1.42
TCF4-213ENST00000562543 GJA10Q969M2 543 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 XPO6Q96QU8 1125 aaKnown RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 MAP3K14Q99558 947 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 KRT23Q9C075 422 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 TOPORSQ9NS56 1045 aaPredicted RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 NCKIPSDQ9NZQ3 722 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 WRAP73Q9P2S5 460 aaPredicted RBP6.15□□□□□ -1.42
TCF4-213ENST00000562543 REV1Q9UBZ9 1251 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 SNX14Q9Y5W7 946 aa6.15□□□□□ -1.42
TCF4-213ENST00000562543 PTPRJQ12913 1337 aa6.15□□□□□ -1.43
TCF4-213ENST00000562543 EPPK1P58107 5090 aaKnown RBP6.15□□□□□ -1.43
TCF4-213ENST00000562543 SONP18583 2426 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 FAM47DPA6NHR8 397 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 NEDD8-MDP1E9PL57 170 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 PRPF40AO75400 957 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 NEBLO76041 1014 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 F13A1P00488 732 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 EPHX1P07099 455 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 TYRP14679 529 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 DNAJA1P31689 397 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 VIPR1P32241 457 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 MEOX1P50221 254 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 RPS14P62263 151 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 PRPF4BQ13523 1007 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 DDR2Q16832 855 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 TTC31Q49AM3 519 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 VWA2Q5GFL6 755 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 JMJD6Q6NYC1 403 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 ZNF517Q6ZMY9 492 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 GGNQ86UU5 652 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 BBS7Q8IWZ6 715 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 SLFN12Q8IYM2 578 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 CACNA2D3Q8IZS8 1091 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 RBBP8NLQ8NC74 664 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 ITLN2Q8WWU7 325 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 FRAT1Q92837 279 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 DACT3Q96B18 629 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 TMEM159Q96B96 161 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 SNRNP40Q96DI7 357 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 SIGLEC10Q96LC7 697 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 CCDC3Q9BQI4 270 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 INTS2Q9H0H0 1204 aaKnown RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 SYNDIG1Q9H7V2 258 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 CNTD2Q9H8S5 307 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 TMLHEQ9NVH6 421 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 KLHL11Q9NVR0 708 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.14□□□□□ -1.43
TCF4-213ENST00000562543 SIRT5Q9NXA8 310 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 LUZP4Q9P127 313 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 TUBGCP4Q9UGJ1 667 aa6.14□□□□□ -1.43
TCF4-213ENST00000562543 POLR3KQ9Y2Y1 108 aaPredicted RBP6.14□□□□□ -1.43
TCF4-213ENST00000562543 A0A0B4J269 797 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 NEMP2A6NFY4 417 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 SERINC4A6NH21 518 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 ACKR2O00590 384 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 MUSKO15146 869 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 MSI1O43347 362 aaKnown RBP6.13□□□□□ -1.43
TCF4-213ENST00000562543 LATO43561 262 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 HMMRO75330 724 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 OAS1P00973 400 aaKnown RBP6.13□□□□□ -1.43
TCF4-213ENST00000562543 DNTTP04053 509 aa6.13□□□□□ -1.43
TCF4-213ENST00000562543 ODC1P11926 461 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms