RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 DPH5Q9H2P9 285 aa22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 ARGLU1Q9NWB6 273 aaPredicted RBP22.92■■□□□ 1.26
SYNGR3-202ENST00000562045 KCNN4O15554 427 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 PABPC1P11940 636 aaKnown RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 MZF1P28698 734 aaPredicted RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 TNFRSF4P43489 277 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 MAPKAPK2P49137 400 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 GDF10P55107 478 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 TRIP13Q15645 432 aaPredicted RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 HEATR6Q6AI08 1181 aaKnown RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 UMODL1-AS1Q8N2C9 162 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 EIF1ADQ8N9N8 165 aaKnown RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CCNYQ8ND76 341 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CASKIN2Q8WXE0 1202 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 EXOC4Q96A65 974 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 HDAC11Q96DB2 347 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 RTP4Q96DX8 246 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 USP29Q9HBJ7 922 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CCDC151A5D8V7 595 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 ACTN2P35609 894 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CSKP41240 450 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 GARSP41250 739 aaKnown RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 NDST2P52849 883 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CDH4P55283 916 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 BRD3Q15059 726 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 PRKD1Q15139 912 aaPredicted RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 KCTD19Q17RG1 926 aaPredicted RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 B4GALNT4Q76KP1 1039 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CHST9Q7L1S5 443 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 IFT81Q8WYA0 676 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 CELF6Q96J87 481 aaKnown RBP22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 LGMNQ99538 433 aa22.91■■□□□ 1.26
SYNGR3-202ENST00000562045 USP34Q70CQ2 3546 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 CHD5Q8TDI0 1954 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 CLDN11O75508 207 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 ZNF33AQ06730 810 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 PPIDQ08752 370 aaKnown RBP22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 AP1B1Q10567 949 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 FBXO43Q4G163 708 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 AFMIDQ63HM1 303 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 CCNI2Q6ZMN8 369 aaPredicted RBP22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 LRRC49Q8IUZ0 686 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 ARHGAP12Q8IWW6 846 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 TP53INP2Q8IXH6 220 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 SYNPOQ8N3V7 929 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 IL17RCQ8NAC3 791 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 DTWD2Q8NBA8 298 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 NETO2Q8NC67 525 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 HTR3CQ8WXA8 447 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 ALG14Q96F25 216 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 TBC1D30Q9Y2I9 924 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 SNX24Q9Y343 169 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 STARD13Q9Y3M8 1113 aa22.9■■□□□ 1.26
SYNGR3-202ENST00000562045 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 ERLIN1O75477 346 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 ADCY8P40145 1251 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 RPL21P46778 160 aaKnown RBP22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 CARSP49589 748 aaKnown RBP22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 ZNF177Q13360 481 aaPredicted RBP22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 MAML2Q8IZL2 1156 aaPredicted RBP22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 GLIS1Q8NBF1 620 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 CYB5D2Q8WUJ1 264 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 SNF8Q96H20 258 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 CIPCQ9C0C6 399 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 ELOVL2Q9NXB9 296 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 OR51B4Q9Y5P0 310 aa22.89■■□□□ 1.26
SYNGR3-202ENST00000562045 DMDP11532 3685 aa22.89■■□□□ 1.25
SYNGR3-202ENST00000562045 WASH3PC4AMC7 463 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 DFFAO00273 331 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 MTSS1O43312 755 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 STK10O94804 968 aaKnown RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 OR1E1P30953 314 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 WASP42768 502 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 CTSOP43234 321 aaPredicted RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 VPS41P49754 854 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 SATB1Q01826 763 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 CALCOCO2Q13137 446 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 HLTFQ14527 1009 aaKnown RBP eCLIP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 TRADDQ15628 312 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 P3H1Q32P28 736 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 PREPLQ4J6C6 727 aaPredicted RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 PITRM1Q5JRX3 1037 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 MBLAC2Q68D91 279 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 AHI1Q8N157 1196 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 ATPAF2Q8N5M1 289 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 ZNF513Q8N8E2 541 aaPredicted RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 ERLEC1Q96DZ1 483 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 SLC39A8Q9C0K1 460 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 KIAA1522Q9P206 1035 aaPredicted RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 A0A0D9SEW6 157 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 ADAM23O75077 832 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 ZSCAN5DPP0CG00 497 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 HNRNPLP14866 589 aaKnown RBP eCLIP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 ETS1P14921 441 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 H2AFXP16104 143 aaPredicted RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 PLEKHG6Q3KR16 790 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 MAP9Q49MG5 647 aa22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 RNF219Q5W0B1 726 aaPredicted RBP22.88■■□□□ 1.25
SYNGR3-202ENST00000562045 PRUNE1Q86TP1 453 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms